Bruker MALDI Biotyper Identification Results Run Info: Run Identifier: 210106-0910-1015 Comment: Operator: maldi@FLEX-PC Run Creation Date/Time: 2021-01-06T09:30:30.433 Number of Tests: 35 Type: Standard BTS-QC: not present BTS-QC Position: Instrument ID: 269944.01064 Server Version: 4.1.100 (PYTH) 174 2019-06-158_01-16-09 Result Overview Sample Name Sample ID Organism (best match) Score Value Organism (second-best match) Score Value B6 (+++) (A) * A 83 (Standard) Klebsiella pneumoniae 2.41 Klebsiella pneumoniae 2.26 B7 (+++) (A) * A 96 (Standard) Klebsiella pneumoniae 2.38 Klebsiella pneumoniae 2.37 B8 (+++) (A) * A 126 (Standard) Klebsiella variicola 2.38 Klebsiella variicola 2.38 B9 (+++) (A) * A 128 (Standard) Klebsiella variicola 2.38 Klebsiella variicola 2.38 B10 (+++) (A) * A 132 (Standard) Klebsiella variicola 2.30 Klebsiella variicola 2.28 B11 (+++) (A) * A 134 (Standard) Klebsiella variicola 2.39 Klebsiella variicola 2.33 B12 (+++) (A) * A 140 (Standard) Klebsiella variicola 2.40 Klebsiella variicola 2.36 Result overview table--continued on next page Report created at 2021-01-06T09:45:46 Research Use Only Page 1 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Result overview table--continued from previous page Sample Name Sample ID Organism (best match) Score Value Organism (second-best match) Score Value C1 (+++) (A) * A 142 (Standard) Klebsiella pneumoniae 2.50 Klebsiella pneumoniae 2.32 C2 (+++) (A) * A 163 (Standard) Klebsiella variicola 2.46 Klebsiella variicola 2.43 C3 (+++) (A) * A 171 (Standard) Klebsiella variicola 2.39 Klebsiella variicola 2.38 C4 (+++) (A) * A 200 (Standard) Klebsiella pneumoniae 2.42 Klebsiella pneumoniae 2.36 C5 (+++) (A) * A 216 (Standard) Klebsiella pneumoniae 2.53 Klebsiella pneumoniae 2.49 C6 (+++) (A) * A 227 (Standard) Klebsiella pneumoniae 2.40 Klebsiella pneumoniae 2.37 C7 (+++) (A) * A 38 (Standard) Klebsiella pneumoniae 2.50 Klebsiella pneumoniae 2.37 C8 (+++) (A) * B 32 (Standard) Klebsiella pneumoniae 2.41 Klebsiella pneumoniae 2.39 C9 (+++) (A) * B 37 (Standard) Klebsiella pneumoniae 2.32 Klebsiella pneumoniae 2.31 C10 (+++) (A) * B 90 (Standard) Klebsiella pneumoniae 2.31 Klebsiella pneumoniae 2.26 C11 (+++) (A) * B 102 (Standard) Klebsiella pneumoniae 2.35 Klebsiella pneumoniae 2.34 C12 (+++) (A) * B 107 (Standard) Klebsiella pneumoniae 2.24 Klebsiella pneumoniae 2.24 D1 (+++) (A) * B 148 (Standard) Klebsiella pneumoniae 2.31 Klebsiella pneumoniae 2.30 D2 (+++) (A) * B 154 (Standard) Klebsiella variicola 2.50 Klebsiella variicola 2.44 D3 (+++) (A) * C 72 (Standard) Klebsiella pneumoniae 2.45 Klebsiella pneumoniae 2.44 D4 (+++) (A) * C 94 (Standard) Klebsiella pneumoniae 2.40 Klebsiella pneumoniae 2.40 Result overview table--continued on next page Report created at 2021-01-06T09:45:46 Research Use Only Page 2 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Result overview table--continued from previous page Sample Name Sample ID Organism (best match) Score Value Organism (second-best match) Score Value D5 (+++) (A) * C 80 (Standard) Klebsiella pneumoniae 2.53 Klebsiella pneumoniae 2.45 D6 (+++) (A) * C 209 (Standard) Klebsiella pneumoniae 2.35 Klebsiella pneumoniae 2.33 D7 (+++) (A) * C 158 (Standard) Klebsiella variicola 2.44 Klebsiella variicola 2.44 D8 (+++) (A) * C 155 (Standard) Klebsiella pneumoniae 2.46 Klebsiella pneumoniae 2.40 D9 (+++) (A) * C 111 (Standard) Klebsiella variicola 2.37 Klebsiella variicola 2.31 D10 (+++) (A) * C 117 (Standard) Klebsiella pneumoniae 2.22 Klebsiella pneumoniae 2.20 D11 (+++) (A) * C 118 (Standard) Klebsiella variicola 2.43 Klebsiella variicola 2.39 D12 (+++) (A) * C 121 (Standard) Klebsiella variicola 2.38 Klebsiella variicola 2.32 E1 (+++) (A) * C 125 (Standard) Klebsiella pneumoniae 2.50 Klebsiella pneumoniae 2.46 E2 (+++) (A) * C 128 (Standard) Klebsiella pneumoniae 2.43 Klebsiella pneumoniae 2.36 E3 (+++) (A) * C 129 (Standard) Klebsiella pneumoniae 2.41 Klebsiella pneumoniae 2.40 E4 (+++) (A) * C 136 (Standard) Klebsiella pneumoniae 2.44 Klebsiella pneumoniae 2.33 Report created at 2021-01-06T09:45:46 Research Use Only Page 3 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Matching Hints Matched Pattern Comment Klebsiella pneumoniae 37585 PFM closely related to Klebsiella variicola Klebsiella pneumoniae 37595 PFM closely related to Klebsiella variicola Klebsiella pneumoniae RV_BA_03_B LBK closely related to Klebsiella variicola Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM closely related to Klebsiella variicola Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM closely related to Klebsiella variicola Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB closely related to Klebsiella variicola Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM closely related to Klebsiella variicola Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM closely related to Klebsiella variicola Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM closely related to Klebsiella variicola Klebsiella variicola 150416_01 BRUS closely related to Klebsiella pneumoniae Klebsiella variicola 150519_01 SAH closely related to Klebsiella pneumoniae Klebsiella variicola 150519_03 SAH closely related to Klebsiella pneumoniae Klebsiella variicola 37924 PFM closely related to Klebsiella pneumoniae Klebsiella variicola CC_2053 MCW closely related to Klebsiella pneumoniae Klebsiella variicola CC_2123 MCW closely related to Klebsiella pneumoniae Matching Hints table--continued on next page Report created at 2021-01-06T09:45:46 Research Use Only Page 4 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Matching Hints table--continued from previous page Matched Pattern Comment Klebsiella variicola DSM 15968T DSM closely related to Klebsiella pneumoniae Klebsiella variicola DSM 15968T HAM closely related to Klebsiella pneumoniae Klebsiella variicola NY_1036 MCW closely related to Klebsiella pneumoniae Klebsiella variicola NY_1064 MCW closely related to Klebsiella pneumoniae Klebsiella variicola NY_1125 MCW closely related to Klebsiella pneumoniae Klebsiella variicola TC_4131 MCW closely related to Klebsiella pneumoniae Report created at 2021-01-06T09:45:46 Research Use Only Page 5 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Meaning of Score Values Range Interpretation Symbols Color 2.00 - 3.00 High-confidence identification (+++) green 1.70 - 1.99 Low-confidence identification (+) yellow 0.00 - 1.69 No Organism Identification Possible (-) red Meaning of Consistency Categories (A - C) Category Interpretation (A) High consistency: The best match is a high-confidence identification. The second-best match is (1) a high-confidence identification in which the species is identical to the best match, (2) a low-confidence identification in which the species or genus is identical to the best match, or (3) a non-identification. (B) Low consistency: The requirements for high consistency are not met. The best match is a high- or low- confidence identification. The second-best match is (1) a high- or low-confidence identification in which the genus is identical to the best match or (2) a non-identification. (C) No consistency: The requirements for high or low consistency are not met. Report created at 2021-01-06T09:45:46 Research Use Only Page 6 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 1 Sample Name: B6 Sample Description: Sample ID: * A 83 Sample Creation Date/Time: 2021-01-06T09:15:33.074 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.41 72407 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.26 573 3 (+++) Klebsiella pneumoniae 37585 PFM 2.26 573 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.26 574 5 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.25 72407 6 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.18 72407 7 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.18 574 8 (+++) Klebsiella pneumoniae 37595 PFM 2.12 573 9 (+++) Klebsiella variicola 150416_01 BRUS 2.04 244366 10 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.00 39831 Report created at 2021-01-06T09:45:46 Research Use Only Page 7 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 2 Sample Name: B7 Sample Description: Sample ID: * A 96 Sample Creation Date/Time: 2021-01-06T09:15:33.075 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.38 72407 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.37 573 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.36 72407 4 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.25 72407 5 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.24 574 6 (+++) Klebsiella pneumoniae 37585 PFM 2.19 573 7 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.17 574 8 (+++) Klebsiella pneumoniae 37595 PFM 2.02 573 9 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.01 39831 10 (+++) Klebsiella variicola DSM 15968T DSM 2.00 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 8 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 3 Sample Name: B8 Sample Description: Sample ID: * A 126 Sample Creation Date/Time: 2021-01-06T09:15:33.075 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola NY_1125 MCW 2.38 244366 2 (+++) Klebsiella variicola CC_2053 MCW 2.38 244366 3 (+++) Klebsiella variicola DSM 15968T DSM 2.36 244366 4 (+++) Klebsiella variicola TC_4131 MCW 2.33 244366 5 (+++) Klebsiella variicola NY_1064 MCW 2.33 244366 6 (+++) Klebsiella variicola 150416_01 BRUS 2.32 244366 7 (+++) Klebsiella variicola CC_2123 MCW 2.30 244366 8 (+++) Klebsiella variicola 150519_03 SAH 2.27 244366 9 (+++) Klebsiella variicola 37924 PFM 2.21 244366 10 (+++) Klebsiella variicola 150519_01 SAH 2.17 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 9 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 4 Sample Name: B9 Sample Description: Sample ID: * A 128 Sample Creation Date/Time: 2021-01-06T09:15:33.076 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola CC_2053 MCW 2.38 244366 2 (+++) Klebsiella variicola DSM 15968T DSM 2.38 244366 3 (+++) Klebsiella variicola 150416_01 BRUS 2.32 244366 4 (+++) Klebsiella variicola TC_4131 MCW 2.28 244366 5 (+++) Klebsiella variicola 150519_03 SAH 2.27 244366 6 (+++) Klebsiella variicola 37924 PFM 2.26 244366 7 (+++) Klebsiella variicola NY_1125 MCW 2.25 244366 8 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.22 72407 9 (+++) Klebsiella variicola NY_1064 MCW 2.19 244366 10 (+++) Klebsiella variicola CC_2123 MCW 2.18 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 10 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 5 Sample Name: B10 Sample Description: Sample ID: * A 132 Sample Creation Date/Time: 2021-01-06T09:15:33.076 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola TC_4131 MCW 2.30 244366 2 (+++) Klebsiella variicola CC_2053 MCW 2.28 244366 3 (+++) Klebsiella variicola 150416_01 BRUS 2.26 244366 4 (+++) Klebsiella variicola 150519_03 SAH 2.22 244366 5 (+++) Klebsiella variicola DSM 15968T DSM 2.21 244366 6 (+++) Klebsiella variicola 37924 PFM 2.17 244366 7 (+++) Klebsiella variicola NY_1064 MCW 2.17 244366 8 (+++) Klebsiella variicola CC_2123 MCW 2.12 244366 9 (+++) Klebsiella variicola NY_1125 MCW 2.11 244366 10 (+++) Klebsiella variicola 150519_01 SAH 2.09 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 11 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 6 Sample Name: B11 Sample Description: Sample ID: * A 134 Sample Creation Date/Time: 2021-01-06T09:15:33.077 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola CC_2053 MCW 2.39 244366 2 (+++) Klebsiella variicola DSM 15968T DSM 2.33 244366 3 (+++) Klebsiella variicola 150416_01 BRUS 2.30 244366 4 (+++) Klebsiella variicola 150519_03 SAH 2.30 244366 5 (+++) Klebsiella variicola TC_4131 MCW 2.24 244366 6 (+++) Klebsiella variicola CC_2123 MCW 2.23 244366 7 (+++) Klebsiella variicola NY_1125 MCW 2.21 244366 8 (+++) Klebsiella variicola NY_1064 MCW 2.21 244366 9 (+++) Klebsiella variicola 37924 PFM 2.16 244366 10 (+++) Klebsiella variicola NY_1036 MCW 2.16 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 12 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 7 Sample Name: B12 Sample Description: Sample ID: * A 140 Sample Creation Date/Time: 2021-01-06T09:15:33.077 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola DSM 15968T DSM 2.40 244366 2 (+++) Klebsiella variicola CC_2053 MCW 2.36 244366 3 (+++) Klebsiella variicola NY_1125 MCW 2.22 244366 4 (+++) Klebsiella variicola 150416_01 BRUS 2.22 244366 5 (+++) Klebsiella variicola TC_4131 MCW 2.22 244366 6 (+++) Klebsiella variicola 150519_03 SAH 2.21 244366 7 (+++) Klebsiella variicola 37924 PFM 2.21 244366 8 (+++) Klebsiella variicola CC_2123 MCW 2.16 244366 9 (+++) Klebsiella variicola NY_1064 MCW 2.14 244366 10 (+++) Klebsiella variicola DSM 15968T HAM 2.05 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 13 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 8 Sample Name: C1 Sample Description: Sample ID: * A 142 Sample Creation Date/Time: 2021-01-06T09:15:33.078 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.50 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.32 72407 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.26 72407 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.26 573 5 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.21 574 6 (+++) Klebsiella pneumoniae 37585 PFM 2.21 573 7 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.17 574 8 (+++) Klebsiella pneumoniae 37595 PFM 2.09 573 9 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.96 39831 10 (+) Klebsiella variicola 150416_01 BRUS 1.96 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 14 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 9 Sample Name: C2 Sample Description: Sample ID: * A 163 Sample Creation Date/Time: 2021-01-06T09:15:33.078 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola 150416_01 BRUS 2.46 244366 2 (+++) Klebsiella variicola CC_2053 MCW 2.43 244366 3 (+++) Klebsiella variicola DSM 15968T DSM 2.33 244366 4 (+++) Klebsiella variicola TC_4131 MCW 2.32 244366 5 (+++) Klebsiella variicola 150519_03 SAH 2.31 244366 6 (+++) Klebsiella variicola 150519_01 SAH 2.31 244366 7 (+++) Klebsiella variicola NY_1064 MCW 2.27 244366 8 (+++) Klebsiella variicola 37924 PFM 2.25 244366 9 (+++) Klebsiella variicola NY_1125 MCW 2.22 244366 10 (+++) Klebsiella variicola CC_2123 MCW 2.22 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 15 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 10 Sample Name: C3 Sample Description: Sample ID: * A 171 Sample Creation Date/Time: 2021-01-06T09:15:33.079 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola 150416_01 BRUS 2.39 244366 2 (+++) Klebsiella variicola CC_2053 MCW 2.38 244366 3 (+++) Klebsiella variicola TC_4131 MCW 2.36 244366 4 (+++) Klebsiella variicola DSM 15968T DSM 2.35 244366 5 (+++) Klebsiella variicola 150519_03 SAH 2.31 244366 6 (+++) Klebsiella variicola NY_1125 MCW 2.27 244366 7 (+++) Klebsiella variicola NY_1064 MCW 2.27 244366 8 (+++) Klebsiella variicola 37924 PFM 2.25 244366 9 (+++) Klebsiella variicola CC_2123 MCW 2.23 244366 10 (+++) Klebsiella variicola 150519_01 SAH 2.19 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 16 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 11 Sample Name: C4 Sample Description: Sample ID: * A 200 Sample Creation Date/Time: 2021-01-06T09:15:33.079 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.42 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.36 72407 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.24 574 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.17 573 5 (+++) Klebsiella pneumoniae 37585 PFM 2.14 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.13 574 7 (+++) Klebsiella variicola 150416_01 BRUS 2.13 244366 8 (+++) Klebsiella pneumoniae 37595 PFM 2.11 573 9 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.09 72407 10 (+++) Klebsiella variicola DSM 15968T DSM 2.05 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 17 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 12 Sample Name: C5 Sample Description: Sample ID: * A 216 Sample Creation Date/Time: 2021-01-06T09:15:33.080 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.53 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.49 72407 3 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.43 573 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.38 574 5 (+++) Klebsiella pneumoniae 37585 PFM 2.33 573 6 (+++) Klebsiella variicola CC_2053 MCW 2.31 244366 7 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.29 574 8 (+++) Klebsiella variicola 150519_03 SAH 2.28 244366 9 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.25 72407 10 (+++) Klebsiella variicola TC_4131 MCW 2.25 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 18 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 13 Sample Name: C6 Sample Description: Sample ID: * A 227 Sample Creation Date/Time: 2021-01-06T09:15:33.080 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.40 72407 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.37 573 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.32 72407 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.31 574 5 (+++) Klebsiella pneumoniae 37585 PFM 2.28 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.24 574 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.17 72407 8 (+++) Klebsiella variicola 150416_01 BRUS 2.08 244366 9 (+++) Klebsiella pneumoniae 37595 PFM 2.05 573 10 (+++) Klebsiella variicola 150519_03 SAH 2.03 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 19 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 14 Sample Name: C7 Sample Description: Sample ID: * A 38 Sample Creation Date/Time: 2021-01-06T09:15:33.081 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.50 574 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.37 72407 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.37 72407 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.24 574 5 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.21 72407 6 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.20 573 7 (+++) Klebsiella pneumoniae 37585 PFM 2.17 573 8 (+++) Klebsiella pneumoniae 37595 PFM 2.11 573 9 (+++) Klebsiella variicola 150416_01 BRUS 2.01 244366 10 (+) Klebsiella variicola CC_2053 MCW 1.99 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 20 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 15 Sample Name: C8 Sample Description: Sample ID: * B 32 Sample Creation Date/Time: 2021-01-06T09:15:33.081 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.41 72407 2 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.39 574 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.34 72407 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.26 574 5 (+++) Klebsiella pneumoniae 37585 PFM 2.23 573 6 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.23 573 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.21 72407 8 (+++) Klebsiella pneumoniae 37595 PFM 2.15 573 9 (+++) Klebsiella variicola 150519_03 SAH 2.06 244366 10 (+++) Klebsiella variicola DSM 15968T DSM 2.01 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 21 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 16 Sample Name: C9 Sample Description: Sample ID: * B 37 Sample Creation Date/Time: 2021-01-06T09:15:33.082 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.32 574 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.31 72407 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.28 72407 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.25 574 5 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.25 573 6 (+++) Klebsiella pneumoniae 37585 PFM 2.20 573 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.16 72407 8 (+++) Klebsiella variicola 150519_03 SAH 2.07 244366 9 (+++) Klebsiella variicola 150416_01 BRUS 2.06 244366 10 (+++) Klebsiella pneumoniae 37595 PFM 2.03 573 Report created at 2021-01-06T09:45:46 Research Use Only Page 22 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 17 Sample Name: C10 Sample Description: Sample ID: * B 90 Sample Creation Date/Time: 2021-01-06T09:15:33.082 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.31 72407 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.26 573 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.23 72407 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.22 574 5 (+++) Klebsiella pneumoniae 37585 PFM 2.19 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.17 574 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.08 72407 8 (+++) Klebsiella variicola 150416_01 BRUS 2.04 244366 9 (+) Klebsiella pneumoniae 37595 PFM 1.99 573 10 (+) Klebsiella variicola TC_4131 MCW 1.95 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 23 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 18 Sample Name: C11 Sample Description: Sample ID: * B 102 Sample Creation Date/Time: 2021-01-06T09:15:33.083 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.35 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.34 72407 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.29 574 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.19 573 5 (+++) Klebsiella pneumoniae 37585 PFM 2.18 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.15 574 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.11 72407 8 (+++) Klebsiella pneumoniae 37595 PFM 2.11 573 9 (+) Klebsiella variicola 150416_01 BRUS 1.99 244366 10 (+) Klebsiella variicola 150519_03 SAH 1.97 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 24 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 19 Sample Name: C12 Sample Description: Sample ID: * B 107 Sample Creation Date/Time: 2021-01-06T09:15:33.083 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.24 72407 2 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.24 574 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.21 72407 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.17 573 5 (+++) Klebsiella pneumoniae 37585 PFM 2.09 573 6 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.08 72407 7 (+++) Klebsiella variicola 150519_03 SAH 2.00 244366 8 (+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.97 574 9 (+) Klebsiella pneumoniae 37595 PFM 1.97 573 10 (+) Klebsiella variicola DSM 15968T DSM 1.95 244366 Report created at 2021-01-06T09:45:46 Research Use Only Page 25 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 20 Sample Name: D1 Sample Description: Sample ID: * B 148 Sample Creation Date/Time: 2021-01-06T09:15:33.084 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.31 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.30 72407 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.24 574 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.07 573 5 (+++) Klebsiella pneumoniae 37585 PFM 2.06 573 6 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.02 72407 7 (+) Klebsiella pneumoniae 37595 PFM 1.99 573 8 (+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.99 574 9 (+) Klebsiella variicola 150519_03 SAH 1.87 244366 10 (+) Klebsiella variicola NY_1064 MCW 1.83 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 26 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 21 Sample Name: D2 Sample Description: Sample ID: * B 154 Sample Creation Date/Time: 2021-01-06T09:15:33.084 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola CC_2053 MCW 2.50 244366 2 (+++) Klebsiella variicola 150416_01 BRUS 2.44 244366 3 (+++) Klebsiella variicola DSM 15968T DSM 2.39 244366 4 (+++) Klebsiella variicola CC_2123 MCW 2.38 244366 5 (+++) Klebsiella variicola TC_4131 MCW 2.34 244366 6 (+++) Klebsiella variicola 150519_03 SAH 2.33 244366 7 (+++) Klebsiella variicola NY_1064 MCW 2.32 244366 8 (+++) Klebsiella variicola 37924 PFM 2.32 244366 9 (+++) Klebsiella variicola NY_1125 MCW 2.28 244366 10 (+++) Klebsiella variicola 150519_01 SAH 2.25 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 27 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 22 Sample Name: D3 Sample Description: Sample ID: * C 72 Sample Creation Date/Time: 2021-01-06T09:15:33.085 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.45 72407 2 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.44 574 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.38 72407 4 (+++) Klebsiella pneumoniae 37585 PFM 2.32 573 5 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.30 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.28 574 7 (+++) Klebsiella variicola 150416_01 BRUS 2.17 244366 8 (+++) Klebsiella variicola 150519_03 SAH 2.16 244366 9 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.14 72407 10 (+++) Klebsiella pneumoniae 37595 PFM 2.13 573 Report created at 2021-01-06T09:45:47 Research Use Only Page 28 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 23 Sample Name: D4 Sample Description: Sample ID: * C 94 Sample Creation Date/Time: 2021-01-06T09:15:33.085 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.40 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.40 72407 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.39 574 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.33 573 5 (+++) Klebsiella pneumoniae 37585 PFM 2.31 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.29 574 7 (+++) Klebsiella pneumoniae 37595 PFM 2.17 573 8 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.11 72407 9 (+++) Klebsiella variicola 150416_01 BRUS 2.09 244366 10 (+++) Klebsiella variicola 150519_03 SAH 2.07 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 29 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 24 Sample Name: D5 Sample Description: Sample ID: * C 80 Sample Creation Date/Time: 2021-01-06T09:15:33.086 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.53 72407 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.45 573 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.33 574 4 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.32 72407 5 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.30 72407 6 (+++) Klebsiella pneumoniae 37585 PFM 2.29 573 7 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.26 574 8 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.19 39831 9 (+++) Klebsiella pneumoniae 37595 PFM 2.16 573 10 (+) Klebsiella variicola 150416_01 BRUS 1.95 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 30 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 25 Sample Name: D6 Sample Description: Sample ID: * C 209 Sample Creation Date/Time: 2021-01-06T09:15:33.086 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.35 72407 2 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.33 574 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.28 72407 4 (+++) Klebsiella pneumoniae 37585 PFM 2.26 573 5 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.24 573 6 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.21 72407 7 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.20 574 8 (+++) Klebsiella variicola 150416_01 BRUS 2.10 244366 9 (+++) Klebsiella pneumoniae 37595 PFM 2.08 573 10 (+++) Klebsiella variicola 150519_03 SAH 2.00 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 31 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 26 Sample Name: D7 Sample Description: Sample ID: * C 158 Sample Creation Date/Time: 2021-01-06T09:15:33.087 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola 150416_01 BRUS 2.44 244366 2 (+++) Klebsiella variicola CC_2053 MCW 2.44 244366 3 (+++) Klebsiella variicola DSM 15968T DSM 2.38 244366 4 (+++) Klebsiella variicola CC_2123 MCW 2.36 244366 5 (+++) Klebsiella variicola NY_1064 MCW 2.34 244366 6 (+++) Klebsiella variicola NY_1125 MCW 2.32 244366 7 (+++) Klebsiella variicola TC_4131 MCW 2.32 244366 8 (+++) Klebsiella variicola 150519_03 SAH 2.29 244366 9 (+++) Klebsiella variicola 37924 PFM 2.27 244366 10 (+++) Klebsiella variicola NY_1036 MCW 2.16 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 32 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 27 Sample Name: D8 Sample Description: Sample ID: * C 155 Sample Creation Date/Time: 2021-01-06T09:15:33.087 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.46 72407 2 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.40 574 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.39 72407 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.33 573 5 (+++) Klebsiella pneumoniae 37585 PFM 2.30 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.27 574 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.25 72407 8 (+++) Klebsiella variicola 150416_01 BRUS 2.21 244366 9 (+++) Klebsiella pneumoniae 37595 PFM 2.16 573 10 (+++) Klebsiella variicola 150519_03 SAH 2.06 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 33 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 28 Sample Name: D9 Sample Description: Sample ID: * C 111 Sample Creation Date/Time: 2021-01-06T09:15:33.088 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola CC_2053 MCW 2.37 244366 2 (+++) Klebsiella variicola DSM 15968T DSM 2.31 244366 3 (+++) Klebsiella variicola 150416_01 BRUS 2.30 244366 4 (+++) Klebsiella variicola 150519_03 SAH 2.25 244366 5 (+++) Klebsiella variicola TC_4131 MCW 2.22 244366 6 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.22 72407 7 (+++) Klebsiella variicola CC_2123 MCW 2.21 244366 8 (+++) Klebsiella variicola 37924 PFM 2.19 244366 9 (+++) Klebsiella variicola NY_1064 MCW 2.18 244366 10 (+++) Klebsiella variicola 150519_01 SAH 2.17 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 34 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 29 Sample Name: D10 Sample Description: Sample ID: * C 117 Sample Creation Date/Time: 2021-01-06T09:15:33.089 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.22 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.20 72407 3 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.17 573 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.17 574 5 (+++) Klebsiella pneumoniae 37585 PFM 2.12 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.12 574 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.03 72407 8 (+) Klebsiella variicola 150519_03 SAH 1.94 244366 9 (+) Klebsiella variicola 37924 PFM 1.92 244366 10 (+) Klebsiella variicola TC_4131 MCW 1.91 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 35 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 30 Sample Name: D11 Sample Description: Sample ID: * C 118 Sample Creation Date/Time: 2021-01-06T09:15:33.089 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola CC_2053 MCW 2.43 244366 2 (+++) Klebsiella variicola 150416_01 BRUS 2.39 244366 3 (+++) Klebsiella variicola TC_4131 MCW 2.37 244366 4 (+++) Klebsiella variicola NY_1064 MCW 2.32 244366 5 (+++) Klebsiella variicola NY_1125 MCW 2.30 244366 6 (+++) Klebsiella variicola DSM 15968T DSM 2.30 244366 7 (+++) Klebsiella variicola CC_2123 MCW 2.29 244366 8 (+++) Klebsiella variicola 150519_03 SAH 2.23 244366 9 (+++) Klebsiella variicola 37924 PFM 2.22 244366 10 (+++) Klebsiella variicola 150519_01 SAH 2.15 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 36 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 31 Sample Name: D12 Sample Description: Sample ID: * C 121 Sample Creation Date/Time: 2021-01-06T09:15:33.090 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola CC_2053 MCW 2.38 244366 2 (+++) Klebsiella variicola DSM 15968T DSM 2.32 244366 3 (+++) Klebsiella variicola 150416_01 BRUS 2.32 244366 4 (+++) Klebsiella variicola TC_4131 MCW 2.30 244366 5 (+++) Klebsiella variicola CC_2123 MCW 2.27 244366 6 (+++) Klebsiella variicola 150519_03 SAH 2.26 244366 7 (+++) Klebsiella variicola NY_1064 MCW 2.25 244366 8 (+++) Klebsiella variicola NY_1125 MCW 2.23 244366 9 (+++) Klebsiella variicola 37924 PFM 2.20 244366 10 (+++) Klebsiella variicola NY_1036 MCW 2.15 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 37 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 32 Sample Name: E1 Sample Description: Sample ID: * C 125 Sample Creation Date/Time: 2021-01-06T09:15:33.090 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.50 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.46 72407 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.43 574 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.40 573 5 (+++) Klebsiella pneumoniae 37585 PFM 2.39 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.32 574 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.20 72407 8 (+++) Klebsiella pneumoniae 37595 PFM 2.20 573 9 (+++) Klebsiella variicola 150416_01 BRUS 2.19 244366 10 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.13 39831 Report created at 2021-01-06T09:45:47 Research Use Only Page 38 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 33 Sample Name: E2 Sample Description: Sample ID: * C 128 Sample Creation Date/Time: 2021-01-06T09:15:33.091 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.43 72407 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.36 573 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.36 72407 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.34 574 5 (+++) Klebsiella pneumoniae 37585 PFM 2.34 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.28 574 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.28 72407 8 (+++) Klebsiella pneumoniae 37595 PFM 2.15 573 9 (+++) Klebsiella variicola 150416_01 BRUS 2.14 244366 10 (+++) Klebsiella variicola 150519_03 SAH 2.13 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 39 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 34 Sample Name: E3 Sample Description: Sample ID: * C 129 Sample Creation Date/Time: 2021-01-06T09:15:33.091 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.41 72407 2 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.40 574 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.38 72407 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.34 573 5 (+++) Klebsiella pneumoniae 37585 PFM 2.31 573 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.29 574 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.27 72407 8 (+++) Klebsiella variicola 150416_01 BRUS 2.23 244366 9 (+++) Klebsiella variicola 150519_03 SAH 2.19 244366 10 (+++) Klebsiella variicola DSM 15968T DSM 2.17 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 40 of 41 Run Identifier: 210106-0910-1015 Run Creation Date/Time: 2021-01-06T09:30:30.433 Sample 35 Sample Name: E4 Sample Description: Sample ID: * C 136 Sample Creation Date/Time: 2021-01-06T09:15:33.092 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.44 574 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.33 72407 3 (+++) Klebsiella pneumoniae 37585 PFM 2.25 573 4 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.23 72407 5 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.18 574 6 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.17 573 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.14 72407 8 (+++) Klebsiella variicola 150519_03 SAH 2.13 244366 9 (+++) Klebsiella variicola 150416_01 BRUS 2.10 244366 10 (+++) Klebsiella variicola CC_2053 MCW 2.07 244366 Report created at 2021-01-06T09:45:47 Research Use Only Page 41 of 41