Bruker MALDI Biotyper Identification Results Run Info: Run Identifier: 210125-1135-10184 Comment: Operator: maldi@FLEX-PC Run Creation Date/Time: 2021-01-25T12:17:25.882 Number of Tests: 35 Type: Standard BTS-QC: not present BTS-QC Position: Instrument ID: 269944.01064 Server Version: 4.1.100 (PYTH) 174 2019-06-158_01-16-09 Result Overview Sample Name Sample ID Organism (best match) Score Value Organism (second-best match) Score Value A1 (+++) (C) * A 1415 (Standard) Acinetobacter baumannii 2.05 Acinetobacter baumannii 2.05 A2 (+++) (A) * A 1420 (Standard) Klebsiella variicola 2.00 Klebsiella variicola 1.98 A3 (+) (B) * A 1332 (Standard) Serratia marcescens 1.91 Serratia marcescens 1.89 A4 (+++) (A) * A 1393 (Standard) Klebsiella variicola 2.14 Klebsiella variicola 2.13 A5 (+++) (A) * A 1395 (Standard) Klebsiella variicola 2.10 Klebsiella variicola 2.08 A6 (+) (B) * A 1407 (Standard) Klebsiella pneumoniae 1.93 Klebsiella pneumoniae 1.80 A7 (+++) (A) * A 1409 (Standard) Klebsiella variicola 2.10 Klebsiella variicola 2.00 Result overview table--continued on next page Report created at 2021-01-25T12:19:35 Research Use Only Page 1 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Result overview table--continued from previous page Sample Name Sample ID Organism (best match) Score Value Organism (second-best match) Score Value A8 (+++) (C) * A 1415 (Standard) Klebsiella variicola 2.05 Klebsiella variicola 1.95 A9 (+) (B) * A 1503 (Standard) Klebsiella variicola 1.95 Klebsiella variicola 1.90 A10 (+++) (A) * A 1524 (Standard) Enterobacter cloacae 2.06 Enterobacter cloacae 1.97 A11 (+++) (A) * A 1429 (Standard) Pseudomonas aeruginosa 2.22 Pseudomonas aeruginosa 2.18 A12 (+++) (A) * A 1449 (Standard) Stenotrophomonas maltophilia 2.12 Stenotrophomonas maltophilia 2.06 B1 (+++) (A) * A 1460 (Standard) Acinetobacter baumannii 2.03 Acinetobacter baumannii 2.00 B2 (+) (B) * A 1488 (Standard) Acinetobacter baumannii 1.90 Acinetobacter baumannii 1.86 B3 (+++) (A) * A 1462 (Standard) Klebsiella pneumoniae 2.11 Klebsiella pneumoniae 2.07 B4 (+++) (A) * A 1466 (Standard) Klebsiella pneumoniae 2.22 Klebsiella pneumoniae 2.13 B5 (+++) (A) * B 1359 (Standard) Klebsiella pneumoniae 2.27 Klebsiella pneumoniae 2.25 B6 (+++) (A) * B 1405 (Standard) Klebsiella pneumoniae 2.22 Klebsiella pneumoniae 2.18 B7 (+++) (A) * C 1821 (Standard) Klebsiella pneumoniae 2.16 Klebsiella pneumoniae 2.10 B8 (+) (B) X (Standard) Klebsiella variicola 1.95 Klebsiella variicola 1.87 B9 (+++) (A) * C 1838 (Standard) Klebsiella pneumoniae 2.12 Klebsiella pneumoniae 2.07 B10 (+++) (A) * C 1825 (Standard) Klebsiella variicola 2.02 Klebsiella variicola 1.90 B11 (+++) (A) * C 1651 (Standard) Klebsiella pneumoniae 2.21 Klebsiella pneumoniae 2.19 Result overview table--continued on next page Report created at 2021-01-25T12:19:35 Research Use Only Page 2 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Result overview table--continued from previous page Sample Name Sample ID Organism (best match) Score Value Organism (second-best match) Score Value B12 (+++) (A) * C 1784 (Standard) Klebsiella pneumoniae 2.24 Klebsiella pneumoniae 2.18 C1 (+++) (A) * C 1811 (Standard) Klebsiella pneumoniae 2.21 Klebsiella pneumoniae 2.19 C2 (+++) (A) * C 1818 (Standard) Klebsiella pneumoniae 2.08 Klebsiella pneumoniae 1.97 C3 (+++) (A) * C 1819 (Standard) Klebsiella variicola 2.35 Klebsiella variicola 2.16 C4 (+++) (A) * C 1840 (Standard) Klebsiella pneumoniae 2.04 Klebsiella pneumoniae 2.04 C5 (+++) (A) * C 1882 (Standard) Klebsiella pneumoniae 2.07 Klebsiella pneumoniae 2.05 C6 (+++) (A) * C 1891 (Standard) Klebsiella variicola 2.07 Klebsiella variicola 2.05 C7 (+) (B) * C 1726 (Standard) Klebsiella pneumoniae 1.86 Klebsiella pneumoniae 1.85 C8 (+++) (A) * C 1691 (Standard) Klebsiella pneumoniae 2.11 Klebsiella pneumoniae 2.00 C9 (+++) (A) * C 1639 (Standard) Klebsiella pneumoniae 2.00 Klebsiella pneumoniae 1.95 C10 (+++) (A) * C 1640 (Standard) Klebsiella pneumoniae 2.35 Klebsiella pneumoniae 2.28 C11 (+++) (A) * C 1731 (Standard) Klebsiella pneumoniae 2.11 Klebsiella pneumoniae 2.09 Report created at 2021-01-25T12:19:35 Research Use Only Page 3 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Matching Hints Matched Pattern Comment Acinetobacter baumannii 13101_1 CHB Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter baumannii B389 UFL Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter baumannii DSM 30007T HAM Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter baumannii DSM 30007T_QC DSM Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter baumannii DSM 30008 DSM Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter baumannii DSM 30011 DSM Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter baumannii ECII RUH_134 HCB Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter baumannii GEIH_2000 HCB Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter baumannii LMG 994 HAM Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter dijkshoorniae DSM 9318 DSM Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter nosocomialis LMG 10626 LMG Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Acinetobacter pittii DSM 9308 DSM Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must be performed to permit reliable species identification. Burkholderia multivorans LMG 14293 HAM is a member of Burkholderia cepacia complex Burkholderia multivorans VA40328_07 ERL is a member of Burkholderia cepacia complex Burkholderia vietnamiensis LMG 10929T HAM is a member of Burkholderia cepacia complex Enterobacter asburiae CCM 4032 CCM is a member of Enterobacter cloacae complex Matching Hints table--continued on next page Report created at 2021-01-25T12:19:35 Research Use Only Page 4 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Matching Hints table--continued from previous page Matched Pattern Comment Enterobacter asburiae RV412_A1_2010_05 LBK is a member of Enterobacter cloacae complex Enterobacter cloacae 13159_1 CHB is a member of Enterobacter cloacae complex Enterobacter cloacae 20105_2 CHB is a member of Enterobacter cloacae complex Enterobacter cloacae MB11506_1 CHB is a member of Enterobacter cloacae complex Enterobacter cloacae MB_5277_05 THL is a member of Enterobacter cloacae complex Enterobacter cloacae MB_8779_05 THL is a member of Enterobacter cloacae complex Enterobacter ludwigii DSM 16688T DSM is a member of Enterobacter cloacae complex Enterobacter xiangfangensis DSM 101093T DSM is a member of Enterobacter cloacae complex Enterobacter xiangfangensis DSM 46348 DSM is a member of Enterobacter cloacae complex Klebsiella pneumoniae 37585 PFM closely related to Klebsiella variicola Klebsiella pneumoniae 37595 PFM closely related to Klebsiella variicola Klebsiella pneumoniae RV_BA_03_B LBK closely related to Klebsiella variicola Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM closely related to Klebsiella variicola Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM closely related to Klebsiella variicola Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM closely related to Klebsiella variicola Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB closely related to Klebsiella variicola Matching Hints table--continued on next page Report created at 2021-01-25T12:19:35 Research Use Only Page 5 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Matching Hints table--continued from previous page Matched Pattern Comment Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM closely related to Klebsiella variicola Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM closely related to Klebsiella variicola Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM closely related to Klebsiella variicola Klebsiella variicola 150416_01 BRUS closely related to Klebsiella pneumoniae Klebsiella variicola 150519_03 SAH closely related to Klebsiella pneumoniae Klebsiella variicola 37924 PFM closely related to Klebsiella pneumoniae Klebsiella variicola CC_2053 MCW closely related to Klebsiella pneumoniae Klebsiella variicola CC_2123 MCW closely related to Klebsiella pneumoniae Klebsiella variicola DSM 15968T DSM closely related to Klebsiella pneumoniae Klebsiella variicola DSM 15968T HAM closely related to Klebsiella pneumoniae Klebsiella variicola NY_1036 MCW closely related to Klebsiella pneumoniae Klebsiella variicola NY_1064 MCW closely related to Klebsiella pneumoniae Klebsiella variicola NY_1125 MCW closely related to Klebsiella pneumoniae Klebsiella variicola TC_4131 MCW closely related to Klebsiella pneumoniae Serratia ficaria 17271986_1 MVD For the species ficaria / vespertilionis of the genus Serratia the 16S rRNA gene sequences are very similar. Therefore distinguishing the mentioned species is difficult. Matching Hints table--continued on next page Report created at 2021-01-25T12:19:35 Research Use Only Page 6 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Matching Hints table--continued from previous page Matched Pattern Comment Serratia ficaria DSM 4569T DSM For the species ficaria / vespertilionis of the genus Serratia the 16S rRNA gene sequences are very similar. Therefore distinguishing the mentioned species is difficult. Serratia marcescens (PX) 24086109 MLD Species marcescens / ureilytica of the genus Serratia have very similar patterns: Therefore distinguishing their species is difficult. Serratia marcescens 13103_1 CHB Species marcescens / ureilytica of the genus Serratia have very similar patterns: Therefore distinguishing their species is difficult. Serratia marcescens DSM 12481 DSM Species marcescens / ureilytica of the genus Serratia have very similar patterns: Therefore distinguishing their species is difficult. Serratia marcescens DSM 12485 DSM Species marcescens / ureilytica of the genus Serratia have very similar patterns: Therefore distinguishing their species is difficult. Serratia marcescens DSM 30122 DSM Species marcescens / ureilytica of the genus Serratia have very similar patterns: Therefore distinguishing their species is difficult. Serratia marcescens ssp marcescens DSM 30121T DSM Species marcescens / ureilytica of the genus Serratia have very similar patterns: Therefore distinguishing their species is difficult. Serratia marcescens ssp sakuensis CIP 107489T HAM Species marcescens / ureilytica of the genus Serratia have very similar patterns: Therefore distinguishing their species is difficult. Serratia ureilytica DSM 16952T DSM Species marcescens / ureilytica of the genus Serratia have very similar patterns: Therefore distinguishing their species is difficult. Stenotrophomonas maltophilia (PX) 23086229 MLD is a member of Stenotrophomonas maltophilia group or closely related Stenotrophomonas maltophilia (Pseudomonas beteli) LMG 978T HAM is a member of Stenotrophomonas maltophilia group or closely related Stenotrophomonas maltophilia (Pseudomonas geniculata) LMG 2195T HAM is a member of Stenotrophomonas maltophilia group or closely related Stenotrophomonas maltophilia (Pseudomonas hibiscicola) LMG 980T HAM is a member of Stenotrophomonas maltophilia group or closely related Stenotrophomonas maltophilia 10942 CHB is a member of Stenotrophomonas maltophilia group or closely related Stenotrophomonas maltophilia DSM 14322 DSM is a member of Stenotrophomonas maltophilia group or closely related Matching Hints table--continued on next page Report created at 2021-01-25T12:19:35 Research Use Only Page 7 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Matching Hints table--continued from previous page Matched Pattern Comment Stenotrophomonas maltophilia DSM 21874 DSM is a member of Stenotrophomonas maltophilia group or closely related Stenotrophomonas maltophilia DSM 50170T BRB is a member of Stenotrophomonas maltophilia group or closely related Stenotrophomonas maltophilia DSM 50170T DSM is a member of Stenotrophomonas maltophilia group or closely related Stenotrophomonas maltophilia DSM 50173 DSM is a member of Stenotrophomonas maltophilia group or closely related Report created at 2021-01-25T12:19:35 Research Use Only Page 8 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Meaning of Score Values Range Interpretation Symbols Color 2.00 - 3.00 High-confidence identification (+++) green 1.70 - 1.99 Low-confidence identification (+) yellow 0.00 - 1.69 No Organism Identification Possible (-) red Meaning of Consistency Categories (A - C) Category Interpretation (A) High consistency: The best match is a high-confidence identification. The second-best match is (1) a high-confidence identification in which the species is identical to the best match, (2) a low-confidence identification in which the species or genus is identical to the best match, or (3) a non-identification. (B) Low consistency: The requirements for high consistency are not met. The best match is a high- or low- confidence identification. The second-best match is (1) a high- or low-confidence identification in which the genus is identical to the best match or (2) a non-identification. (C) No consistency: The requirements for high or low consistency are not met. Report created at 2021-01-25T12:19:35 Research Use Only Page 9 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 1 Sample Name: A1 Sample Description: Sample ID: * A 1415 Sample Creation Date/Time: 2021-01-25T11:43:01.922 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based C on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Acinetobacter baumannii DSM 30007T_QC DSM 2.05 470 2 (+++) Acinetobacter baumannii DSM 30007T HAM 2.05 470 3 (+++) Acinetobacter baumannii 13101_1 CHB 2.03 470 4 (+++) Acinetobacter baumannii DSM 30008 DSM 2.02 470 5 (+) Acinetobacter baumannii LMG 994 HAM 1.98 470 6 (+) Acinetobacter baumannii B389 UFL 1.97 470 7 (+) Acinetobacter baumannii GEIH_2000 HCB 1.83 470 8 (+) Acinetobacter baumannii DSM 30011 DSM 1.77 470 9 (-) Acinetobacter nosocomialis LMG 10626 LMG 1.69 72607 10 (-) Acinetobacter dijkshoorniae DSM 9318 DSM 1.65 469 Report created at 2021-01-25T12:19:35 Research Use Only Page 10 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 2 Sample Name: A2 Sample Description: Sample ID: * A 1420 Sample Creation Date/Time: 2021-01-25T11:43:01.923 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola DSM 15968T DSM 2.00 244366 2 (+) Klebsiella variicola CC_2053 MCW 1.98 244366 3 (+) Klebsiella variicola TC_4131 MCW 1.95 244366 4 (+) Klebsiella variicola 150519_03 SAH 1.94 244366 5 (+) Klebsiella variicola NY_1125 MCW 1.86 244366 6 (+) Klebsiella variicola CC_2123 MCW 1.86 244366 7 (+) Klebsiella variicola NY_1036 MCW 1.84 244366 8 (+) Klebsiella variicola 150416_01 BRUS 1.83 244366 9 (+) Klebsiella variicola DSM 15968T HAM 1.79 244366 10 (+) Klebsiella variicola NY_1064 MCW 1.77 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 11 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 3 Sample Name: A3 Sample Description: Sample ID: * A 1332 Sample Creation Date/Time: 2021-01-25T11:43:01.923 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based B on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+) Serratia marcescens (PX) 24086109 MLD 1.91 615 2 (+) Serratia marcescens ssp sakuensis CIP 107489T HAM 1.89 211760 3 (+) Serratia ureilytica DSM 16952T DSM 1.85 300181 4 (+) Serratia marcescens ssp marcescens DSM 30121T DSM 1.83 211759 5 (+) Serratia marcescens 13103_1 CHB 1.83 615 6 (+) Serratia ficaria 17271986_1 MVD 1.79 61651 7 (-) Serratia marcescens DSM 12485 DSM 1.67 615 8 (-) Serratia marcescens DSM 12481 DSM 1.62 615 9 (-) Serratia marcescens DSM 30122 DSM 1.60 615 10 (-) Serratia ficaria DSM 4569T DSM 1.58 61651 Report created at 2021-01-25T12:19:35 Research Use Only Page 12 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 4 Sample Name: A4 Sample Description: Sample ID: * A 1393 Sample Creation Date/Time: 2021-01-25T11:43:01.924 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola 150519_03 SAH 2.14 244366 2 (+++) Klebsiella variicola NY_1036 MCW 2.13 244366 3 (+++) Klebsiella variicola CC_2123 MCW 2.11 244366 4 (+++) Klebsiella variicola DSM 15968T DSM 2.07 244366 5 (+++) Klebsiella variicola CC_2053 MCW 2.07 244366 6 (+++) Klebsiella variicola NY_1125 MCW 2.04 244366 7 (+++) Klebsiella variicola TC_4131 MCW 2.02 244366 8 (+++) Klebsiella variicola DSM 15968T HAM 2.02 244366 9 (+) Klebsiella variicola 150416_01 BRUS 1.99 244366 10 (+) Klebsiella variicola NY_1064 MCW 1.99 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 13 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 5 Sample Name: A5 Sample Description: Sample ID: * A 1395 Sample Creation Date/Time: 2021-01-25T11:43:01.925 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola DSM 15968T DSM 2.10 244366 2 (+++) Klebsiella variicola 150519_03 SAH 2.08 244366 3 (+++) Klebsiella variicola CC_2123 MCW 2.06 244366 4 (+++) Klebsiella variicola DSM 15968T HAM 2.06 244366 5 (+++) Klebsiella variicola NY_1125 MCW 2.04 244366 6 (+++) Klebsiella variicola NY_1036 MCW 2.00 244366 7 (+++) Klebsiella variicola TC_4131 MCW 2.00 244366 8 (+++) Klebsiella variicola CC_2053 MCW 2.00 244366 9 (+) Klebsiella variicola NY_1064 MCW 1.98 244366 10 (+) Klebsiella variicola 150416_01 BRUS 1.77 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 14 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 6 Sample Name: A6 Sample Description: Sample ID: * A 1407 Sample Creation Date/Time: 2021-01-25T11:43:01.925 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based B on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.93 72407 2 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.80 72407 3 (+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.77 574 4 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.74 574 5 (+) Klebsiella variicola CC_2123 MCW 1.74 244366 6 (+) Klebsiella variicola NY_1036 MCW 1.73 244366 7 (-) Klebsiella variicola 150519_03 SAH 1.68 244366 8 (-) Klebsiella variicola NY_1125 MCW 1.67 244366 9 (-) Klebsiella pneumoniae 37585 PFM 1.65 573 10 (-) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.65 39831 Report created at 2021-01-25T12:19:35 Research Use Only Page 15 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 7 Sample Name: A7 Sample Description: Sample ID: * A 1409 Sample Creation Date/Time: 2021-01-25T11:43:01.926 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola DSM 15968T DSM 2.10 244366 2 (+++) Klebsiella variicola 150519_03 SAH 2.00 244366 3 (+) Klebsiella variicola DSM 15968T HAM 1.95 244366 4 (+) Klebsiella variicola CC_2053 MCW 1.92 244366 5 (+) Klebsiella variicola NY_1125 MCW 1.90 244366 6 (+) Klebsiella variicola 150416_01 BRUS 1.89 244366 7 (+) Klebsiella variicola TC_4131 MCW 1.89 244366 8 (+) Klebsiella variicola NY_1064 MCW 1.89 244366 9 (+) Klebsiella variicola NY_1036 MCW 1.87 244366 10 (+) Klebsiella variicola CC_2123 MCW 1.86 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 16 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 8 Sample Name: A8 Sample Description: Sample ID: * A 1415 Sample Creation Date/Time: 2021-01-25T11:43:01.926 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based C on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola DSM 15968T DSM 2.05 244366 2 (+) Klebsiella variicola CC_2123 MCW 1.95 244366 3 (+) Klebsiella variicola NY_1036 MCW 1.91 244366 4 (+) Klebsiella variicola NY_1125 MCW 1.88 244366 5 (+) Klebsiella variicola TC_4131 MCW 1.87 244366 6 (+) Klebsiella variicola CC_2053 MCW 1.87 244366 7 (+) Klebsiella variicola 150519_03 SAH 1.87 244366 8 (+) Klebsiella variicola 150416_01 BRUS 1.84 244366 9 (+) Klebsiella variicola DSM 15968T HAM 1.82 244366 10 (+) Klebsiella variicola NY_1064 MCW 1.76 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 17 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 9 Sample Name: A9 Sample Description: Sample ID: * A 1503 Sample Creation Date/Time: 2021-01-25T11:43:01.927 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based B on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+) Klebsiella variicola CC_2123 MCW 1.95 244366 2 (+) Klebsiella variicola NY_1036 MCW 1.90 244366 3 (+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.89 574 4 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.86 39831 5 (+) Klebsiella variicola 150519_03 SAH 1.84 244366 6 (+) Klebsiella variicola CC_2053 MCW 1.80 244366 7 (+) Klebsiella variicola TC_4131 MCW 1.79 244366 8 (+) Klebsiella variicola NY_1064 MCW 1.78 244366 9 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.77 574 10 (+) Klebsiella variicola NY_1125 MCW 1.76 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 18 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 10 Sample Name: A10 Sample Description: Sample ID: * A 1524 Sample Creation Date/Time: 2021-01-25T11:43:01.927 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Enterobacter cloacae MB_5277_05 THL 2.06 550 2 (+) Enterobacter cloacae MB_8779_05 THL 1.97 550 3 (+) Enterobacter xiangfangensis DSM 46348 DSM 1.87 547 4 (+) Enterobacter xiangfangensis DSM 101093T DSM 1.77 547 5 (+) Enterobacter cloacae MB11506_1 CHB 1.73 550 6 (-) Enterobacter cloacae 20105_2 CHB 1.54 550 7 (-) Enterobacter asburiae CCM 4032 CCM 1.51 61645 8 (-) Enterobacter ludwigii DSM 16688T DSM 1.50 299767 9 (-) Enterobacter cloacae 13159_1 CHB 1.49 550 10 (-) Enterobacter asburiae RV412_A1_2010_05 LBK 1.43 61645 Report created at 2021-01-25T12:19:35 Research Use Only Page 19 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 11 Sample Name: A11 Sample Description: Sample ID: * A 1429 Sample Creation Date/Time: 2021-01-25T11:43:01.928 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Pseudomonas aeruginosa DSM 50071T HAM 2.22 287 2 (+++) Pseudomonas aeruginosa 19955_1 CHB 2.18 287 3 (+++) Pseudomonas aeruginosa 8147_2 CHB 2.12 287 4 (+++) Pseudomonas aeruginosa ATCC 27853 THL 2.11 287 5 (+) Pseudomonas aeruginosa DSM 1117 DSM 1.91 287 6 (+) Pseudomonas aeruginosa DSM 50071T_QC DSM 1.88 287 7 (+) Pseudomonas aeruginosa A07_08_Pudu FLR 1.86 287 8 (+) Pseudomonas aeruginosa LMG 8029 LMG 1.70 287 9 (-) Pseudomonas aeruginosa DSM 1128 DSM 1.66 287 10 (-) Burkholderia plantarii DSM 9509T HAM 1.18 41899 Report created at 2021-01-25T12:19:35 Research Use Only Page 20 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 12 Sample Name: A12 Sample Description: Sample ID: * A 1449 Sample Creation Date/Time: 2021-01-25T11:43:01.928 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Stenotrophomonas maltophilia DSM 50170T BRB 2.12 40324 2 (+++) Stenotrophomonas maltophilia (PX) 23086229 MLD 2.06 40324 3 (+++) Stenotrophomonas maltophilia DSM 50170T DSM 2.00 40324 4 (+) Stenotrophomonas maltophilia DSM 50173 DSM 1.82 40324 5 (+) Stenotrophomonas maltophilia 10942 CHB 1.81 40324 6 (+) Stenotrophomonas maltophilia DSM 21874 DSM 1.78 40324 7 (+) Stenotrophomonas maltophilia (Pseudomonas hibiscicola) LMG 980T HAM 1.75 40324 8 (+) Stenotrophomonas maltophilia (Pseudomonas geniculata) LMG 2195T HAM 1.74 40324 9 (-) Stenotrophomonas maltophilia (Pseudomonas beteli) LMG 978T HAM 1.61 40324 10 (-) Stenotrophomonas maltophilia DSM 14322 DSM 1.57 40324 Report created at 2021-01-25T12:19:35 Research Use Only Page 21 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 13 Sample Name: B1 Sample Description: Sample ID: * A 1460 Sample Creation Date/Time: 2021-01-25T11:43:01.929 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Acinetobacter baumannii DSM 30007T HAM 2.03 470 2 (+++) Acinetobacter baumannii LMG 994 HAM 2.00 470 3 (+) Burkholderia multivorans LMG 14293 HAM 1.93 87883 4 (+) Acinetobacter baumannii B389 UFL 1.90 470 5 (+) Acinetobacter baumannii 13101_1 CHB 1.85 470 6 (+) Acinetobacter baumannii DSM 30011 DSM 1.73 470 7 (-) Burkholderia multivorans VA40328_07 ERL 1.69 87883 8 (-) Acinetobacter baumannii DSM 30007T_QC DSM 1.67 470 9 (-) Acinetobacter baumannii DSM 30008 DSM 1.65 470 10 (-) Burkholderia vietnamiensis LMG 10929T HAM 1.64 60552 Report created at 2021-01-25T12:19:35 Research Use Only Page 22 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 14 Sample Name: B2 Sample Description: Sample ID: * A 1488 Sample Creation Date/Time: 2021-01-25T11:43:01.929 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based B on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+) Acinetobacter baumannii DSM 30007T HAM 1.90 470 2 (+) Acinetobacter baumannii 13101_1 CHB 1.86 470 3 (+) Acinetobacter baumannii DSM 30008 DSM 1.79 470 4 (+) Acinetobacter baumannii LMG 994 HAM 1.74 470 5 (+) Acinetobacter baumannii DSM 30011 DSM 1.73 470 6 (+) Acinetobacter baumannii GEIH_2000 HCB 1.72 470 7 (+) Acinetobacter baumannii B389 UFL 1.70 470 8 (-) Acinetobacter baumannii DSM 30007T_QC DSM 1.61 470 9 (-) Acinetobacter baumannii ECII RUH_134 HCB 1.49 470 10 (-) Acinetobacter pittii DSM 9308 DSM 1.43 48296 Report created at 2021-01-25T12:19:35 Research Use Only Page 23 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 15 Sample Name: B3 Sample Description: Sample ID: * A 1462 Sample Creation Date/Time: 2021-01-25T11:43:01.930 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.11 574 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.07 72407 3 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.02 573 4 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.01 72407 5 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.99 39831 6 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.87 574 7 (+) Klebsiella variicola NY_1036 MCW 1.82 244366 8 (+) Klebsiella variicola TC_4131 MCW 1.79 244366 9 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.78 72407 10 (+) Klebsiella pneumoniae 37585 PFM 1.78 573 Report created at 2021-01-25T12:19:35 Research Use Only Page 24 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 16 Sample Name: B4 Sample Description: Sample ID: * A 1466 Sample Creation Date/Time: 2021-01-25T11:43:01.930 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.22 72407 2 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.13 574 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.11 72407 4 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.00 39831 5 (+) Klebsiella pneumoniae RV_BA_03_B LBK 1.96 573 6 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.91 574 7 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.86 72407 8 (+) Klebsiella variicola CC_2053 MCW 1.85 244366 9 (+) Klebsiella variicola TC_4131 MCW 1.83 244366 10 (+) Klebsiella variicola NY_1125 MCW 1.80 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 25 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 17 Sample Name: B5 Sample Description: Sample ID: * B 1359 Sample Creation Date/Time: 2021-01-25T11:43:01.931 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.27 574 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.25 573 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.18 72407 4 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.17 72407 5 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.16 39831 6 (+++) Klebsiella pneumoniae 37585 PFM 2.12 573 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.07 72407 8 (+++) Klebsiella variicola DSM 15968T HAM 2.05 244366 9 (+) Klebsiella pneumoniae 37595 PFM 1.93 573 10 (+) Klebsiella variicola DSM 15968T DSM 1.90 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 26 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 18 Sample Name: B6 Sample Description: Sample ID: * B 1405 Sample Creation Date/Time: 2021-01-25T11:43:01.931 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.22 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.18 72407 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.17 574 4 (+++) Klebsiella pneumoniae 37585 PFM 2.13 573 5 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.13 573 6 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.10 72407 7 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.07 574 8 (+++) Klebsiella variicola CC_2053 MCW 2.02 244366 9 (+) Klebsiella variicola 150519_03 SAH 1.98 244366 10 (+) Klebsiella variicola 150416_01 BRUS 1.96 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 27 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 19 Sample Name: B7 Sample Description: Sample ID: * C 1821 Sample Creation Date/Time: 2021-01-25T11:43:01.932 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.16 72407 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.10 573 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.00 574 4 (+++) Klebsiella pneumoniae 37585 PFM 2.00 573 5 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.97 72407 6 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.91 72407 7 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.89 574 8 (+) Klebsiella variicola NY_1125 MCW 1.88 244366 9 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.85 39831 10 (+) Klebsiella variicola 150519_03 SAH 1.84 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 28 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 20 Sample Name: B8 Sample Description: Sample ID: X Sample Creation Date/Time: 2021-01-25T11:43:01.932 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based B on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+) Klebsiella variicola DSM 15968T DSM 1.95 244366 2 (+) Klebsiella variicola NY_1125 MCW 1.87 244366 3 (+) Klebsiella variicola TC_4131 MCW 1.85 244366 4 (+) Klebsiella variicola CC_2123 MCW 1.83 244366 5 (+) Klebsiella variicola 150416_01 BRUS 1.83 244366 6 (+) Klebsiella variicola CC_2053 MCW 1.80 244366 7 (+) Klebsiella variicola NY_1036 MCW 1.78 244366 8 (+) Klebsiella variicola 150519_03 SAH 1.73 244366 9 (+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.71 72407 10 (+) Klebsiella variicola DSM 15968T HAM 1.70 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 29 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 21 Sample Name: B9 Sample Description: Sample ID: * C 1838 Sample Creation Date/Time: 2021-01-25T11:43:01.933 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.12 72407 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.07 573 3 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.06 72407 4 (+++) Klebsiella pneumoniae 37585 PFM 2.06 573 5 (+++) Klebsiella variicola DSM 15968T DSM 2.02 244366 6 (+++) Klebsiella variicola CC_2053 MCW 2.01 244366 7 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.00 574 8 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.98 72407 9 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.98 39831 10 (+) Klebsiella variicola DSM 15968T HAM 1.96 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 30 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 22 Sample Name: B10 Sample Description: Sample ID: * C 1825 Sample Creation Date/Time: 2021-01-25T11:43:01.933 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola DSM 15968T DSM 2.02 244366 2 (+) Klebsiella variicola 150519_03 SAH 1.90 244366 3 (+) Klebsiella variicola CC_2123 MCW 1.88 244366 4 (+) Klebsiella variicola CC_2053 MCW 1.86 244366 5 (+) Klebsiella variicola NY_1125 MCW 1.85 244366 6 (+) Klebsiella variicola NY_1036 MCW 1.83 244366 7 (+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.81 72407 8 (+) Klebsiella variicola TC_4131 MCW 1.78 244366 9 (+) Klebsiella pneumoniae RV_BA_03_B LBK 1.77 573 10 (+) Klebsiella variicola 37924 PFM 1.76 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 31 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 23 Sample Name: B11 Sample Description: Sample ID: * C 1651 Sample Creation Date/Time: 2021-01-25T11:43:01.934 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.21 574 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.19 72407 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.18 72407 4 (+++) Klebsiella pneumoniae 37585 PFM 2.17 573 5 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.16 573 6 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.16 72407 7 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.03 39831 8 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.02 574 9 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.95 574 10 (+) Klebsiella pneumoniae 37595 PFM 1.90 573 Report created at 2021-01-25T12:19:35 Research Use Only Page 32 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 24 Sample Name: B12 Sample Description: Sample ID: * C 1784 Sample Creation Date/Time: 2021-01-25T11:43:01.934 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.24 574 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.18 72407 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.08 72407 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.06 573 5 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.01 39831 6 (+) Klebsiella variicola NY_1125 MCW 1.99 244366 7 (+) Klebsiella variicola TC_4131 MCW 1.99 244366 8 (+) Klebsiella pneumoniae 37585 PFM 1.98 573 9 (+) Klebsiella variicola CC_2053 MCW 1.95 244366 10 (+) Klebsiella variicola 37924 PFM 1.94 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 33 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 25 Sample Name: C1 Sample Description: Sample ID: * C 1811 Sample Creation Date/Time: 2021-01-25T11:43:01.935 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.21 574 2 (+++) Klebsiella pneumoniae 37585 PFM 2.19 573 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.18 72407 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.17 573 5 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.16 39831 6 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.13 72407 7 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.10 72407 8 (+) Klebsiella variicola 150416_01 BRUS 1.93 244366 9 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.92 574 10 (+) Klebsiella variicola 150519_03 SAH 1.92 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 34 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 26 Sample Name: C2 Sample Description: Sample ID: * C 1818 Sample Creation Date/Time: 2021-01-25T11:43:01.935 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.08 574 2 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.97 72407 3 (+) Klebsiella variicola CC_2123 MCW 1.94 244366 4 (+) Klebsiella pneumoniae RV_BA_03_B LBK 1.89 573 5 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.89 72407 6 (+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.88 72407 7 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.87 39831 8 (+) Klebsiella variicola TC_4131 MCW 1.85 244366 9 (+) Klebsiella variicola NY_1125 MCW 1.84 244366 10 (+) Klebsiella variicola NY_1036 MCW 1.84 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 35 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 27 Sample Name: C3 Sample Description: Sample ID: * C 1819 Sample Creation Date/Time: 2021-01-25T11:43:01.936 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola DSM 15968T DSM 2.35 244366 2 (+++) Klebsiella variicola TC_4131 MCW 2.16 244366 3 (+++) Klebsiella variicola NY_1125 MCW 2.13 244366 4 (+++) Klebsiella variicola CC_2053 MCW 2.13 244366 5 (+++) Klebsiella variicola 150519_03 SAH 2.12 244366 6 (+++) Klebsiella variicola CC_2123 MCW 2.09 244366 7 (+++) Klebsiella variicola NY_1036 MCW 2.05 244366 8 (+++) Klebsiella variicola 150416_01 BRUS 2.05 244366 9 (+++) Klebsiella variicola 37924 PFM 2.01 244366 10 (+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.98 72407 Report created at 2021-01-25T12:19:35 Research Use Only Page 36 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 28 Sample Name: C4 Sample Description: Sample ID: * C 1840 Sample Creation Date/Time: 2021-01-25T11:43:01.936 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.04 72407 2 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.04 573 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.02 574 4 (+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.98 72407 5 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.92 72407 6 (+) Klebsiella pneumoniae 37585 PFM 1.89 573 7 (+) Klebsiella variicola CC_2053 MCW 1.88 244366 8 (+) Klebsiella variicola 150519_03 SAH 1.88 244366 9 (+) Klebsiella variicola CC_2123 MCW 1.88 244366 10 (+) Klebsiella variicola NY_1125 MCW 1.87 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 37 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 29 Sample Name: C5 Sample Description: Sample ID: * C 1882 Sample Creation Date/Time: 2021-01-25T11:43:01.937 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.07 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.05 72407 3 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.05 573 4 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.01 574 5 (+) Klebsiella pneumoniae 37585 PFM 1.94 573 6 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.92 72407 7 (+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.88 574 8 (+) Klebsiella variicola NY_1125 MCW 1.85 244366 9 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.83 574 10 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.78 39831 Report created at 2021-01-25T12:19:35 Research Use Only Page 38 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 30 Sample Name: C6 Sample Description: Sample ID: * C 1891 Sample Creation Date/Time: 2021-01-25T11:43:01.938 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella variicola 150416_01 BRUS 2.07 244366 2 (+++) Klebsiella variicola DSM 15968T DSM 2.05 244366 3 (+++) Klebsiella variicola NY_1125 MCW 2.00 244366 4 (+++) Klebsiella variicola TC_4131 MCW 2.00 244366 5 (+) Klebsiella variicola 150519_03 SAH 1.99 244366 6 (+) Klebsiella variicola CC_2053 MCW 1.92 244366 7 (+) Klebsiella variicola 37924 PFM 1.92 244366 8 (+) Klebsiella variicola NY_1064 MCW 1.89 244366 9 (+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.87 72407 10 (+) Klebsiella variicola NY_1036 MCW 1.85 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 39 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 31 Sample Name: C7 Sample Description: Sample ID: * C 1726 Sample Creation Date/Time: 2021-01-25T11:43:01.938 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based B on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.86 574 2 (+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.85 72407 3 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.81 72407 4 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.75 39831 5 (+) Klebsiella pneumoniae RV_BA_03_B LBK 1.72 573 6 (-) Klebsiella variicola CC_2123 MCW 1.65 244366 7 (-) Klebsiella variicola NY_1036 MCW 1.65 244366 8 (-) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.63 574 9 (-) Klebsiella variicola CC_2053 MCW 1.63 244366 10 (-) Klebsiella variicola NY_1125 MCW 1.61 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 40 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 32 Sample Name: C8 Sample Description: Sample ID: * C 1691 Sample Creation Date/Time: 2021-01-25T11:43:01.939 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.11 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.00 72407 3 (+) Klebsiella pneumoniae 37585 PFM 1.96 573 4 (+) Klebsiella pneumoniae RV_BA_03_B LBK 1.95 573 5 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.92 39831 6 (+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.92 574 7 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.90 72407 8 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.83 574 9 (+) Klebsiella variicola NY_1036 MCW 1.78 244366 10 (+) Klebsiella variicola 150416_01 BRUS 1.76 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 41 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 33 Sample Name: C9 Sample Description: Sample ID: * C 1639 Sample Creation Date/Time: 2021-01-25T11:43:01.939 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.00 574 2 (+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.95 72407 3 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.95 72407 4 (+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.87 574 5 (+) Klebsiella variicola 37924 PFM 1.82 244366 6 (+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.81 39831 7 (+) Klebsiella variicola NY_1125 MCW 1.80 244366 8 (+) Klebsiella pneumoniae RV_BA_03_B LBK 1.80 573 9 (+) Klebsiella variicola NY_1036 MCW 1.79 244366 10 (+) Klebsiella variicola CC_2123 MCW 1.78 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 42 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 34 Sample Name: C10 Sample Description: Sample ID: * C 1640 Sample Creation Date/Time: 2021-01-25T11:43:01.940 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.35 72407 2 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.28 72407 3 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.24 574 4 (+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.21 573 5 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.18 72407 6 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.14 574 7 (+++) Klebsiella pneumoniae 37585 PFM 2.12 573 8 (+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.10 39831 9 (+) Klebsiella variicola NY_1125 MCW 1.96 244366 10 (+) Klebsiella variicola CC_2053 MCW 1.95 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 43 of 44 Run Identifier: 210125-1135-10184 Run Creation Date/Time: 2021-01-25T12:17:25.882 Sample 35 Sample Name: C11 Sample Description: Sample ID: * C 1731 Sample Creation Date/Time: 2021-01-25T11:43:01.940 Sample Type: Standard Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par AutoXecute Method: MBT_AutoX Consistency Category (based A on 2 best matches): Applied Taxonomy Tree: Bruker Taxonomy Rank (Quality) Matched Pattern Score Value NCBI Identifier 1 (+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.11 574 2 (+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.09 72407 3 (+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.04 72407 4 (+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.91 574 5 (+) Klebsiella pneumoniae RV_BA_03_B LBK 1.91 573 6 (+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.86 72407 7 (+) Klebsiella variicola 37924 PFM 1.83 244366 8 (+) Klebsiella variicola CC_2053 MCW 1.81 244366 9 (+) Klebsiella variicola NY_1064 MCW 1.79 244366 10 (+) Klebsiella variicola CC_2123 MCW 1.79 244366 Report created at 2021-01-25T12:19:35 Research Use Only Page 44 of 44