Bruker MALDI Biotyper 
Identification Results 


Run Info: 
Run Identifier: 210315-1227-10184 
Comment: 
Operator: maldi@FLEX-PC 
Run Creation Date/Time: 2021-03-15T12:57:47.558 
Number of Tests: 33 
Type: Standard 
BTS-QC: not present 
BTS-QC Position: 
Instrument ID: 269944.01064 
Server Version: 4.1.100 (PYTH) 174 2019-06-158_01-16-09 
Result Overview 

Sample 
Name Sample ID Organism (best match) Score 
Value 
Organism (second-best 
match) 
Score 
Value 
A1 
(+++) (A) 
* A 5207 
(Standard) Klebsiella variicola 2.28 Klebsiella variicola 2.20 
A2 
(+++) (A) 
* A 5235 
(Standard) Klebsiella pneumoniae 2.15 Klebsiella pneumoniae 2.12 
A3 
(+++) (A) 
* A 5241 
(Standard) Klebsiella pneumoniae 2.30 Klebsiella pneumoniae 2.30 
A4 
(+++) (A) 
* A 5260 
(Standard) Klebsiella pneumoniae 2.22 Klebsiella pneumoniae 2.19 
A5 
(+++) (A) 
* A 5265 
(Standard) Klebsiella pneumoniae 2.31 Klebsiella pneumoniae 2.31 
A6 
(+++) (A) 
* A 5247 
(Standard) Klebsiella pneumoniae 2.42 Klebsiella pneumoniae 2.34 
A7 
(+++) (A) 
* A 5297 
(Standard) Klebsiella variicola 2.04 Klebsiella variicola 2.03 
Result overview table--continued on next page 

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Result overview table--continued from previous page 
Sample 
Name Sample ID Organism (best match) Score 
Value 
Organism (second-best 
match) 
Score 
Value 
A8 
(+) (B) 
* A 5299 
(Standard) Klebsiella variicola 1.89 Klebsiella variicola 1.86 
A9 
(+++) (A) 
* B 866 
(Standard) Klebsiella variicola 2.00 Klebsiella variicola 1.94 
A10 
(+++) (A) 
* B 864 
(Standard) Acinetobacter baumannii 2.13 Acinetobacter baumannii 2.00 
A11 
(+) (B) 
* B 924 
(Standard) Klebsiella pneumoniae 1.76 No Organism Identification 
Possible 1.63 
A12 
(-) (C) 
* B 804 
(Standard) 
No Organism Identification 
Possible 1.53 No Organism Identification 
Possible 1.33 
B1 
(+) (B) 
* C 771 
(Standard) Klebsiella pneumoniae 1.75 No Organism Identification 
Possible 1.67 
B2 
(+++) (A) 
* C 822 
(Standard) Klebsiella pneumoniae 2.03 Klebsiella pneumoniae 1.99 
B3 
(+++) (A) 
* C 864 
(Standard) Klebsiella pneumoniae 2.16 Klebsiella pneumoniae 2.15 
B4 
(+++) (A) 
* C 832 
(Standard) Klebsiella pneumoniae 2.12 Klebsiella pneumoniae 2.10 
B5 
(+++) (A) 
* C 786 
(Standard) Klebsiella pneumoniae 2.27 Klebsiella pneumoniae 2.24 
B6 
(+++) (A) 
* C 794 
(Standard) Klebsiella variicola 2.23 Klebsiella variicola 2.21 
B7 
(+++) (A) 
* C 821 
(Standard) Klebsiella pneumoniae 2.14 Klebsiella pneumoniae 2.13 
B8 
(+++) (A) 
* C 810 
(Standard) Klebsiella pneumoniae 2.07 Klebsiella pneumoniae 2.06 
B9 
(+++) (A) 
* C 5689 
(Standard) Klebsiella pneumoniae 2.00 Klebsiella pneumoniae 1.87 
B10 
(+++) (A) 
* C 5732 
(Standard) Klebsiella pneumoniae 2.14 Klebsiella pneumoniae 2.11 
B11 
(+++) (A) 
* C 5753 
(Standard) Klebsiella pneumoniae 2.15 Klebsiella pneumoniae 2.07 
Result overview table--continued on next page 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 

Result overview table--continued from previous page 
Sample 
Name Sample ID Organism (best match) Score 
Value 
Organism (second-best 
match) 
Score 
Value 
B12 
(+) (B) 
* C 5757 
(Standard) Klebsiella pneumoniae 1.96 Klebsiella pneumoniae 1.94 
C1 
(+) (B) 
* C 5774 
(Standard) Pseudomonas aeruginosa 1.86 Pseudomonas aeruginosa 1.72 
C2 
(+) (B) 
* C 5708 
(Standard) Acinetobacter guillouiae 1.71 Acinetobacter guillouiae 1.71 
C3 
(-) (C) 
* C 5557 
(Standard) 
No Organism Identification 
Possible 1.57 No Organism Identification 
Possible 1.52 
C4 
(+) (B) 
* C 5609 
(Standard) Klebsiella pneumoniae 1.90 Klebsiella pneumoniae 1.83 
C5 
(+++) (A) 
* C 5671 
(Standard) Klebsiella pneumoniae 2.09 Klebsiella pneumoniae 1.94 
C6 
(+++) (A) 
* C 5674 
(Standard) Klebsiella pneumoniae 2.00 Klebsiella pneumoniae 1.87 
C7 
(+) (B) 
* C 5678 
(Standard) Klebsiella pneumoniae 1.99 Klebsiella pneumoniae 1.93 
C8 
(-) (C) 
* C 5685 
(Standard) 
No Organism Identification 
Possible 1.68 No Organism Identification 
Possible 1.66 
C9 
(-) (C) 
XXX 
(Standard) no peaks found 0.00 no peaks found 0.00 

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Matching Hints 

Matched Pattern Comment 
Acinetobacter baumannii 
13101_1 CHB 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter baumannii B389 
UFL 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter baumannii DSM 
30007T HAM 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter baumannii DSM 
30007T_QC DSM 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter baumannii DSM 
30008 DSM 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter baumannii DSM 
30011 DSM 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter baumannii 
GEIH_2000 HCB 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter baumannii LMG 
994 HAM 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter gerneri DSM 
14967T HAM 
Species of this genus have very similar patterns: Therefore distinguishing their 
species is difficult. 
Acinetobacter johnsonii DSM 
6963T HAM 
Species of this genus have very similar patterns: Therefore distinguishing their 
species is difficult. 
Acinetobacter johnsonii LMG 
983 LMG 
Species of this genus have very similar patterns: Therefore distinguishing their 
species is difficult. 
Acinetobacter junii DSM 14968 
HAM 
Species of this genus have very similar patterns: Therefore distinguishing their 
species is difficult. 
Acinetobacter junii DSM 6964T 
HAM 
Species of this genus have very similar patterns: Therefore distinguishing their 
species is difficult. 
Acinetobacter nosocomialis 
LMG 10624 LMG 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter nosocomialis 
LMG 10626 LMG 
Member of the Acinetobacter baumannii /calcoaceticus complex. Extraction must 
be performed to permit reliable species identification. 
Acinetobacter tandoii DSM 
14970T HAM 
Species of this genus have very similar patterns: Therefore distinguishing their 
species is difficult. 
Matching Hints table--continued on next page 

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Matching Hints table--continued from previous page 
Matched Pattern Comment 
Klebsiella aerogenes ATCC 
13048T THL synonym of Enterobacter aerogenes 
Klebsiella pneumoniae 37585 
PFM closely related to Klebsiella variicola 
Klebsiella pneumoniae 37595 
PFM closely related to Klebsiella variicola 
Klebsiella pneumoniae 
RV_BA_03_B LBK closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
ozaenae CCM 5792T CCM closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
ozaenae DSM 16358T DSM closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
ozaenae DSM 16358T HAM closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
pneumoniae 9295_1 CHB closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
pneumoniae DSM 30104T 
HAM 
closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
pneumoniae DSM 30104T_QC 
DSM 
closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
rhinoscleromatis DSM 16231T 
HAM 
closely related to Klebsiella variicola 
Klebsiella variicola 150416_01 
BRUS closely related to Klebsiella pneumoniae 
Klebsiella variicola 150519_01 
SAH closely related to Klebsiella pneumoniae 
Klebsiella variicola 150519_03 
SAH closely related to Klebsiella pneumoniae 
Klebsiella variicola 37924 PFM closely related to Klebsiella pneumoniae 
Klebsiella variicola CC_2053 
MCW closely related to Klebsiella pneumoniae 
Matching Hints table--continued on next page 

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Matching Hints table--continued from previous page 
Matched Pattern Comment 
Klebsiella variicola CC_2123 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola DSM 
15968T DSM closely related to Klebsiella pneumoniae 
Klebsiella variicola DSM 
15968T HAM closely related to Klebsiella pneumoniae 
Klebsiella variicola NY_1036 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola NY_1064 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola NY_1125 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola TC_4131 
MCW closely related to Klebsiella pneumoniae 
Pseudomonas plecoglossicida 
DSM 15088T HAM is a member of Pseudomonas putida group 

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Meaning of Score Values 

Range Interpretation Symbols Color 
2.00 - 3.00 High-confidence identification (+++) green 
1.70 - 1.99 Low-confidence identification (+) yellow 
0.00 - 1.69 No Organism Identification Possible (-) red 

Meaning of Consistency Categories (A - C) 

Category Interpretation 
(A) 
High consistency: The best match is a high-confidence identification. The second-best match is (1) a 
high-confidence identification in which the species is identical to the best match, (2) a low-confidence 
identification in which the species or genus is identical to the best match, or (3) a non-identification. 
(B) 
Low consistency: The requirements for high consistency are not met. The best match is a high- or low-
confidence identification. The second-best match is (1) a high- or low-confidence identification in 
which the genus is identical to the best match or (2) a non-identification. 
(C) No consistency: The requirements for high or low consistency are not met. 

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Sample 1 

Sample Name: A1 
Sample Description: 
Sample ID: * A 5207 
Sample Creation Date/Time: 2021-03-15T12:43:26.304 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola 150416_01 BRUS 2.28 244366 
2 
(+++) Klebsiella variicola 150519_03 SAH 2.20 244366 
3 
(+++) Klebsiella variicola DSM 15968T DSM 2.20 244366 
4 
(+++) Klebsiella variicola CC_2053 MCW 2.20 244366 
5 
(+++) Klebsiella variicola TC_4131 MCW 2.11 244366 
6 
(+++) Klebsiella variicola 37924 PFM 2.11 244366 
7 
(+++) Klebsiella variicola CC_2123 MCW 2.09 244366 
8 
(+++) Klebsiella variicola NY_1125 MCW 2.09 244366 
9 
(+++) Klebsiella variicola NY_1036 MCW 2.05 244366 
10 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.01 72407 

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Sample 2 

Sample Name: A2 
Sample Description: 
Sample ID: * A 5235 
Sample Creation Date/Time: 2021-03-15T12:43:26.305 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.15 72407 
2 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.12 574 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.09 72407 
4 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.09 573 
5 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.04 574 
6 
(+++) Klebsiella pneumoniae 37585 PFM 2.03 573 
7 
(+) Klebsiella pneumoniae 37595 PFM 1.94 573 
8 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.92 72407 
9 
(+) Klebsiella variicola TC_4131 MCW 1.84 244366 
10 
(+) Klebsiella variicola 150519_03 SAH 1.79 244366 

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Sample 3 

Sample Name: A3 
Sample Description: 
Sample ID: * A 5241 
Sample Creation Date/Time: 2021-03-15T12:43:26.305 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.30 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.30 72407 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.29 72407 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.26 72407 
5 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.25 573 
6 
(+++) Klebsiella pneumoniae 37585 PFM 2.23 573 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.23 574 
8 
(+++) Klebsiella variicola 150416_01 BRUS 2.22 244366 
9 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.16 39831 
10 
(+++) Klebsiella variicola NY_1064 MCW 2.16 244366 

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Sample 4 

Sample Name: A4 
Sample Description: 
Sample ID: * A 5260 
Sample Creation Date/Time: 2021-03-15T12:43:26.306 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.22 72407 
2 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.19 574 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.18 72407 
4 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.15 574 
5 
(+++) Klebsiella pneumoniae 37585 PFM 2.15 573 
6 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.12 573 
7 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.07 72407 
8 
(+) Klebsiella variicola 150416_01 BRUS 1.96 244366 
9 
(+) Klebsiella variicola NY_1064 MCW 1.94 244366 
10 
(+) Klebsiella variicola CC_2053 MCW 1.93 244366 

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Sample 5 

Sample Name: A5 
Sample Description: 
Sample ID: * A 5265 
Sample Creation Date/Time: 2021-03-15T12:43:26.306 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.31 72407 
2 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.31 574 
3 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.28 574 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.25 72407 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.19 72407 
6 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.18 573 
7 
(+++) Klebsiella pneumoniae 37585 PFM 2.17 573 
8 
(+++) Klebsiella pneumoniae 37595 PFM 2.09 573 
9 
(+++) Klebsiella variicola 150416_01 BRUS 2.01 244366 
10 
(+++) Klebsiella variicola CC_2123 MCW 2.01 244366 

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Sample 6 

Sample Name: A6 
Sample Description: 
Sample ID: * A 5247 
Sample Creation Date/Time: 2021-03-15T12:43:26.307 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.42 72407 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.34 72407 
3 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.28 573 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.18 72407 
5 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.18 574 
6 
(+++) Klebsiella pneumoniae 37585 PFM 2.17 573 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.15 574 
8 
(+++) Klebsiella pneumoniae 37595 PFM 2.09 573 
9 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.00 39831 
10 
(+) Klebsiella variicola TC_4131 MCW 1.97 244366 

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Sample 7 

Sample Name: A7 
Sample Description: 
Sample ID: * A 5297 
Sample Creation Date/Time: 2021-03-15T12:43:26.307 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola 150519_03 SAH 2.04 244366 
2 
(+++) Klebsiella variicola DSM 15968T DSM 2.03 244366 
3 
(+++) Klebsiella variicola TC_4131 MCW 2.00 244366 
4 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.98 574 
5 
(+) Klebsiella variicola 150416_01 BRUS 1.95 244366 
6 
(+) Klebsiella variicola NY_1064 MCW 1.90 244366 
7 
(+) Klebsiella variicola 37924 PFM 1.90 244366 
8 
(+) Klebsiella variicola CC_2053 MCW 1.89 244366 
9 
(+) Klebsiella variicola CC_2123 MCW 1.87 244366 
10 
(+) Klebsiella variicola NY_1125 MCW 1.87 244366 

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Sample 8 

Sample Name: A8 
Sample Description: 
Sample ID: * A 5299 
Sample Creation Date/Time: 2021-03-15T12:43:26.308 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella variicola 150416_01 BRUS 1.89 244366 
2 
(+) Klebsiella variicola CC_2053 MCW 1.86 244366 
3 
(+) Klebsiella variicola DSM 15968T DSM 1.84 244366 
4 
(+) Klebsiella variicola NY_1064 MCW 1.81 244366 
5 
(+) Klebsiella variicola NY_1125 MCW 1.81 244366 
6 
(+) Klebsiella variicola TC_4131 MCW 1.79 244366 
7 
(+) Klebsiella variicola 37924 PFM 1.78 244366 
8 
(+) Klebsiella variicola CC_2123 MCW 1.76 244366 
9 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.75 574 
10 
(+) Klebsiella variicola 150519_03 SAH 1.75 244366 

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Sample 9 

Sample Name: A9 
Sample Description: 
Sample ID: * B 866 
Sample Creation Date/Time: 2021-03-15T12:43:26.308 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola 150416_01 BRUS 2.00 244366 
2 
(+) Klebsiella variicola TC_4131 MCW 1.94 244366 
3 
(+) Klebsiella variicola DSM 15968T DSM 1.94 244366 
4 
(+) Klebsiella variicola CC_2123 MCW 1.92 244366 
5 
(+) Klebsiella variicola NY_1125 MCW 1.91 244366 
6 
(+) Klebsiella variicola DSM 15968T HAM 1.87 244366 
7 
(+) Klebsiella variicola CC_2053 MCW 1.87 244366 
8 
(+) Klebsiella variicola 150519_03 SAH 1.86 244366 
9 
(+) Klebsiella variicola NY_1036 MCW 1.85 244366 
10 
(+) Klebsiella variicola NY_1064 MCW 1.80 244366 

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Sample 10 

Sample Name: A10 
Sample Description: 
Sample ID: * B 864 
Sample Creation Date/Time: 2021-03-15T12:43:26.309 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Acinetobacter baumannii DSM 30007T HAM 2.13 470 
2 
(+++) Acinetobacter baumannii LMG 994 HAM 2.00 470 
3 
(+) Acinetobacter baumannii 13101_1 CHB 1.93 470 
4 
(+) Acinetobacter baumannii B389 UFL 1.92 470 
5 
(+) Acinetobacter baumannii DSM 30007T_QC DSM 1.89 470 
6 
(+) Acinetobacter baumannii DSM 30008 DSM 1.80 470 
7 
(+) Acinetobacter baumannii GEIH_2000 HCB 1.77 470 
8 
(-) Acinetobacter nosocomialis LMG 10626 LMG 1.66 72607 
9 
(-) Acinetobacter baumannii DSM 30011 DSM 1.66 470 
10 
(-) Acinetobacter nosocomialis LMG 10624 LMG 1.64 72607 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 11 

Sample Name: A11 
Sample Description: 
Sample ID: * B 924 
Sample Creation Date/Time: 2021-03-15T12:43:26.309 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.76 72407 
2 
(-) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.63 39831 
3 
(-) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.59 574 
4 
(-) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.52 72407 
5 
(-) Klebsiella pneumoniae RV_BA_03_B LBK 1.41 573 
6 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.39 72407 
7 
(-) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.38 574 
8 
(-) Klebsiella variicola DSM 15968T HAM 1.36 244366 
9 
(-) Klebsiella variicola NY_1125 MCW 1.32 244366 
10 
(-) Klebsiella variicola NY_1036 MCW 1.28 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 12 

Sample Name: A12 
Sample Description: 
Sample ID: * B 804 
Sample Creation Date/Time: 2021-03-15T12:43:26.310 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based C 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(-) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.53 72407 
2 
(-) Klebsiella pneumoniae RV_BA_03_B LBK 1.33 573 
3 
(-) Aromatoleum bremensis PbN1 MPB 1.30 12960 
4 
(-) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.29 574 
5 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.29 72407 
6 
(-) Lactobacillus delbrueckii ssp indicus DSM 15996T DSM 1.28 249265 
7 
(-) Dietzia natronolimnaea 091216_01 LSM 1.28 161920 
8 
(-) Mycoplasma hyorhinis FLR 1.27 2100 
9 
(-) Lactobacillus reuteri DSM 8534 DSM 1.27 1598 
10 
(-) Lodderomyces elongisporus CBS 2605T CBS 1.27 36914 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 13 

Sample Name: B1 
Sample Description: 
Sample ID: * C 771 
Sample Creation Date/Time: 2021-03-15T12:43:26.310 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.75 72407 
2 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.67 72407 
3 
(-) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.61 39831 
4 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.57 72407 
5 
(-) Klebsiella variicola TC_4131 MCW 1.55 244366 
6 
(-) Klebsiella variicola 150416_01 BRUS 1.52 244366 
7 
(-) Klebsiella variicola NY_1064 MCW 1.49 244366 
8 
(-) Klebsiella pneumoniae 37585 PFM 1.48 573 
9 
(-) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.45 574 
10 
(-) Klebsiella aerogenes ATCC 13048T THL 1.43 28451 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 14 

Sample Name: B2 
Sample Description: 
Sample ID: * C 822 
Sample Creation Date/Time: 2021-03-15T12:43:26.311 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.03 39831 
2 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.99 72407 
3 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.94 574 
4 
(+) Klebsiella pneumoniae 37585 PFM 1.93 573 
5 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.87 574 
6 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.86 72407 
7 
(+) Klebsiella pneumoniae RV_BA_03_B LBK 1.86 573 
8 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.86 72407 
9 
(+) Klebsiella variicola NY_1125 MCW 1.81 244366 
10 
(+) Klebsiella variicola 150519_03 SAH 1.81 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 15 

Sample Name: B3 
Sample Description: 
Sample ID: * C 864 
Sample Creation Date/Time: 2021-03-15T12:43:26.311 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.16 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.15 72407 
3 
(+++) Klebsiella pneumoniae 37585 PFM 2.12 573 
4 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.08 573 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.06 72407 
6 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.05 39831 
7 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.03 72407 
8 
(+) Klebsiella variicola 150416_01 BRUS 1.98 244366 
9 
(+) Klebsiella variicola 150519_03 SAH 1.93 244366 
10 
(+) Klebsiella variicola 37924 PFM 1.93 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 16 

Sample Name: B4 
Sample Description: 
Sample ID: * C 832 
Sample Creation Date/Time: 2021-03-15T12:43:26.312 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.12 72407 
2 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.10 574 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.10 72407 
4 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.05 573 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.01 72407 
6 
(+++) Klebsiella pneumoniae 37585 PFM 2.01 573 
7 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.98 39831 
8 
(+) Klebsiella variicola NY_1125 MCW 1.96 244366 
9 
(+) Klebsiella variicola CC_2053 MCW 1.94 244366 
10 
(+) Klebsiella variicola CC_2123 MCW 1.90 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 17 

Sample Name: B5 
Sample Description: 
Sample ID: * C 786 
Sample Creation Date/Time: 2021-03-15T12:43:26.312 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.27 72407 
2 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.24 574 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.18 72407 
4 
(+++) Klebsiella pneumoniae 37585 PFM 2.14 573 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.14 72407 
6 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.14 573 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.12 574 
8 
(+++) Klebsiella variicola CC_2053 MCW 2.04 244366 
9 
(+++) Klebsiella variicola 37924 PFM 2.03 244366 
10 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.01 39831 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 18 

Sample Name: B6 
Sample Description: 
Sample ID: * C 794 
Sample Creation Date/Time: 2021-03-15T12:43:26.313 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola DSM 15968T DSM 2.23 244366 
2 
(+++) Klebsiella variicola 150519_03 SAH 2.21 244366 
3 
(+++) Klebsiella variicola NY_1125 MCW 2.21 244366 
4 
(+++) Klebsiella variicola CC_2123 MCW 2.18 244366 
5 
(+++) Klebsiella variicola 150416_01 BRUS 2.18 244366 
6 
(+++) Klebsiella variicola CC_2053 MCW 2.18 244366 
7 
(+++) Klebsiella variicola TC_4131 MCW 2.18 244366 
8 
(+++) Klebsiella variicola NY_1036 MCW 2.14 244366 
9 
(+++) Klebsiella variicola 37924 PFM 2.12 244366 
10 
(+++) Klebsiella variicola 150519_01 SAH 2.08 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 19 

Sample Name: B7 
Sample Description: 
Sample ID: * C 821 
Sample Creation Date/Time: 2021-03-15T12:43:26.313 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.14 573 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.13 72407 
3 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.08 39831 
4 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.07 574 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.03 72407 
6 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.01 72407 
7 
(+++) Klebsiella pneumoniae 37585 PFM 2.01 573 
8 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.92 574 
9 
(+) Klebsiella variicola 150519_03 SAH 1.90 244366 
10 
(+) Klebsiella variicola CC_2053 MCW 1.83 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 20 

Sample Name: B8 
Sample Description: 
Sample ID: * C 810 
Sample Creation Date/Time: 2021-03-15T12:43:26.314 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.07 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.06 72407 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.04 72407 
4 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.02 573 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.01 72407 
6 
(+) Klebsiella pneumoniae 37585 PFM 1.92 573 
7 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.91 39831 
8 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.89 574 
9 
(+) Klebsiella variicola CC_2053 MCW 1.86 244366 
10 
(+) Klebsiella variicola CC_2123 MCW 1.85 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 21 

Sample Name: B9 
Sample Description: 
Sample ID: * C 5689 
Sample Creation Date/Time: 2021-03-15T12:43:26.314 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.00 39831 
2 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.87 72407 
3 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.86 72407 
4 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.77 574 
5 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.71 72407 
6 
(-) Klebsiella variicola CC_2053 MCW 1.68 244366 
7 
(-) Klebsiella variicola CC_2123 MCW 1.65 244366 
8 
(-) Klebsiella pneumoniae RV_BA_03_B LBK 1.64 573 
9 
(-) Klebsiella pneumoniae 37585 PFM 1.61 573 
10 
(-) Klebsiella aerogenes ATCC 13048T THL 1.60 28451 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 22 

Sample Name: B10 
Sample Description: 
Sample ID: * C 5732 
Sample Creation Date/Time: 2021-03-15T12:43:26.315 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.14 72407 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.11 72407 
3 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.09 574 
4 
(+++) Klebsiella pneumoniae 37585 PFM 2.07 573 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.02 72407 
6 
(+) Klebsiella pneumoniae RV_BA_03_B LBK 1.98 573 
7 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.97 574 
8 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.93 39831 
9 
(+) Klebsiella variicola NY_1125 MCW 1.92 244366 
10 
(+) Klebsiella variicola CC_2123 MCW 1.91 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 23 

Sample Name: B11 
Sample Description: 
Sample ID: * C 5753 
Sample Creation Date/Time: 2021-03-15T12:43:26.315 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.15 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.07 72407 
3 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.00 39831 
4 
(+) Klebsiella variicola CC_2053 MCW 1.99 244366 
5 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.97 72407 
6 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.95 72407 
7 
(+) Klebsiella variicola CC_2123 MCW 1.95 244366 
8 
(+) Klebsiella variicola TC_4131 MCW 1.95 244366 
9 
(+) Klebsiella variicola NY_1125 MCW 1.92 244366 
10 
(+) Klebsiella variicola 150416_01 BRUS 1.89 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 24 

Sample Name: B12 
Sample Description: 
Sample ID: * C 5757 
Sample Creation Date/Time: 2021-03-15T12:43:26.316 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.96 574 
2 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.94 72407 
3 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.83 72407 
4 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.77 574 
5 
(+) Klebsiella pneumoniae RV_BA_03_B LBK 1.75 573 
6 
(+) Klebsiella pneumoniae 37585 PFM 1.74 573 
7 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.71 72407 
8 
(-) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.69 39831 
9 
(-) Klebsiella variicola CC_2123 MCW 1.68 244366 
10 
(-) Klebsiella variicola 37924 PFM 1.67 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 25 

Sample Name: C1 
Sample Description: 
Sample ID: * C 5774 
Sample Creation Date/Time: 2021-03-15T12:43:26.316 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Pseudomonas aeruginosa 19955_1 CHB 1.86 287 
2 
(+) Pseudomonas aeruginosa 8147_2 CHB 1.72 287 
3 
(+) Pseudomonas aeruginosa ATCC 27853 THL 1.70 287 
4 
(-) Pseudomonas aeruginosa DSM 50071T HAM 1.59 287 
5 
(-) Pseudomonas aeruginosa DSM 50071T_QC DSM 1.40 287 
6 
(-) Pseudomonas aeruginosa DSM 1117 DSM 1.34 287 
7 
(-) Pseudomonas aeruginosa DSM 1128 DSM 1.32 287 
8 
(-) Pseudomonas agarici DSM 11810T HAM 1.31 46677 
9 
(-) Gluconobacter oxydans ssp oxydans B544 UFL 1.31 442 
10 
(-) Pseudomonas plecoglossicida DSM 15088T HAM 1.31 70775 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 26 

Sample Name: C2 
Sample Description: 
Sample ID: * C 5708 
Sample Creation Date/Time: 2021-03-15T12:43:26.317 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Acinetobacter guillouiae CIP 63_46T CIP 1.71 469 
2 
(+) Acinetobacter guillouiae DSM 590T DSM 1.71 106649 
3 
(-) Acinetobacter tandoii DSM 14970T HAM 1.52 202954 
4 
(-) Acinetobacter gerneri DSM 14967T HAM 1.52 202952 
5 
(-) Acinetobacter johnsonii DSM 6963T HAM 1.48 40214 
6 
(-) Acinetobacter junii DSM 6964T HAM 1.42 40215 
7 
(-) Acinetobacter bereziniae CIP 70_12T CIP 1.40 469 
8 
(-) Acinetobacter johnsonii LMG 983 LMG 1.35 40214 
9 
(-) Acinetobacter junii DSM 14968 HAM 1.33 40215 
10 
(-) Acinetobacter bereziniae CICC 23979_a CICC 1.33 469 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 27 

Sample Name: C3 
Sample Description: 
Sample ID: * C 5557 
Sample Creation Date/Time: 2021-03-15T12:43:26.318 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based C 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(-) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.57 72407 
2 
(-) Klebsiella variicola NY_1125 MCW 1.52 244366 
3 
(-) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.51 39831 
4 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.48 72407 
5 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.46 72407 
6 
(-) Klebsiella variicola TC_4131 MCW 1.44 244366 
7 
(-) Klebsiella variicola CC_2123 MCW 1.43 244366 
8 
(-) Klebsiella pneumoniae RV_BA_03_B LBK 1.41 573 
9 
(-) Klebsiella variicola NY_1064 MCW 1.38 244366 
10 
(-) Klebsiella variicola 150416_01 BRUS 1.37 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 28 

Sample Name: C4 
Sample Description: 
Sample ID: * C 5609 
Sample Creation Date/Time: 2021-03-15T12:43:26.318 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.90 72407 
2 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.83 72407 
3 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.77 39831 
4 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.71 574 
5 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.71 72407 
6 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.70 574 
7 
(-) Klebsiella pneumoniae RV_BA_03_B LBK 1.69 573 
8 
(-) Klebsiella pneumoniae 37585 PFM 1.61 573 
9 
(-) Klebsiella variicola 37924 PFM 1.60 244366 
10 
(-) Klebsiella variicola CC_2123 MCW 1.54 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 29 

Sample Name: C5 
Sample Description: 
Sample ID: * C 5671 
Sample Creation Date/Time: 2021-03-15T12:43:26.319 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.09 72407 
2 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.94 72407 
3 
(+) Klebsiella pneumoniae RV_BA_03_B LBK 1.92 573 
4 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.89 72407 
5 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.86 574 
6 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.78 39831 
7 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.76 574 
8 
(+) Klebsiella pneumoniae 37585 PFM 1.71 573 
9 
(-) Klebsiella variicola DSM 15968T HAM 1.66 244366 
10 
(-) Klebsiella variicola DSM 15968T DSM 1.62 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 30 

Sample Name: C6 
Sample Description: 
Sample ID: * C 5674 
Sample Creation Date/Time: 2021-03-15T12:43:26.319 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.00 72407 
2 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.87 39831 
3 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.84 72407 
4 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.80 574 
5 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.80 574 
6 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.76 72407 
7 
(-) Klebsiella pneumoniae RV_BA_03_B LBK 1.66 573 
8 
(-) Klebsiella variicola NY_1036 MCW 1.61 244366 
9 
(-) Klebsiella variicola CC_2123 MCW 1.61 244366 
10 
(-) Klebsiella variicola 150519_03 SAH 1.61 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 31 

Sample Name: C7 
Sample Description: 
Sample ID: * C 5678 
Sample Creation Date/Time: 2021-03-15T12:43:26.320 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.99 72407 
2 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.93 39831 
3 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.84 72407 
4 
(+) Klebsiella pneumoniae 37585 PFM 1.83 573 
5 
(+) Klebsiella pneumoniae RV_BA_03_B LBK 1.81 573 
6 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.78 574 
7 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.76 574 
8 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.73 72407 
9 
(-) Klebsiella variicola DSM 15968T HAM 1.66 244366 
10 
(-) Klebsiella variicola CC_2123 MCW 1.65 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 32 

Sample Name: C8 
Sample Description: 
Sample ID: * C 5685 
Sample Creation Date/Time: 2021-03-15T12:43:26.320 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based C 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.68 72407 
2 
(-) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.66 72407 
3 
(-) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.64 574 
4 
(-) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.58 39831 
5 
(-) Klebsiella variicola DSM 15968T HAM 1.56 244366 
6 
(-) Klebsiella pneumoniae RV_BA_03_B LBK 1.55 573 
7 
(-) Klebsiella variicola CC_2053 MCW 1.54 244366 
8 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.50 72407 
9 
(-) Klebsiella variicola DSM 15968T DSM 1.46 244366 
10 
(-) Klebsiella variicola NY_1064 MCW 1.42 244366 

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Run Identifier: 210315-1227-10184 Run Creation Date/Time: 2021-03-15T12:57:47.558 


Sample 33 

Sample Name: C9 
Sample Description: 
Sample ID: XXX 
Sample Creation Date/Time: 2021-03-15T12:43:26.321 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based C 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(-) no peaks found 0.00 -
2 
(-) no peaks found 0.00 -
3 
(-) no peaks found 0.00 -
4 
(-) no peaks found 0.00 -
5 
(-) no peaks found 0.00 -
6 
(-) no peaks found 0.00 -
7 
(-) no peaks found 0.00 -
8 
(-) no peaks found 0.00 -
9 
(-) no peaks found 0.00 -
10 
(-) no peaks found 0.00 -

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