Bruker MALDI Biotyper 
Identification Results 


Run Info: 
Run Identifier: 210322-1212-10113 
Comment: 
Operator: maldi@FLEX-PC 
Run Creation Date/Time: 2021-03-22T12:30:50.333 
Number of Tests: 18 
Type: Standard 
BTS-QC: not present 
BTS-QC Position: 
Instrument ID: 269944.01064 
Server Version: 4.1.100 (PYTH) 174 2019-06-158_01-16-09 
Result Overview 

Sample 
Name Sample ID Organism (best match) Score 
Value 
Organism (second-best 
match) 
Score 
Value 
A3 
(+++) (A) 
* A 5833 
(Standard) Klebsiella variicola 2.53 Klebsiella variicola 2.52 
A4 
(+++) (A) 
* A 5844 
(Standard) Klebsiella pneumoniae 2.36 Klebsiella pneumoniae 2.29 
A5 
(+) (B) 
* A 5850 
(Standard) Klebsiella pneumoniae 1.84 Klebsiella pneumoniae 1.77 
A6 
(+++) (A) 
* A 5851 
(Standard) Klebsiella pneumoniae 2.38 Klebsiella pneumoniae 2.36 
A7 
(+++) (A) 
* A 5854 
(Standard) Klebsiella pneumoniae 2.29 Klebsiella pneumoniae 2.28 
A8 
(+++) (A) 
* A 5856 
(Standard) Klebsiella pneumoniae 2.39 Klebsiella pneumoniae 2.34 
A9 
(+++) (A) 
* A 5860 
(Standard) Klebsiella pneumoniae 2.38 Klebsiella pneumoniae 2.37 
Result overview table--continued on next page 

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Result overview table--continued from previous page 
Sample 
Name Sample ID Organism (best match) Score 
Value 
Organism (second-best 
match) 
Score 
Value 
A10 
(+++) (A) 
* A 5937 
(Standard) Klebsiella pneumoniae 2.12 Klebsiella pneumoniae 2.01 
A11 
(+) (B) 
* B 629 
(Standard) Klebsiella pneumoniae 1.92 Klebsiella pneumoniae 1.89 
A12 
(+++) (A) 
* B 576 
(Standard) Klebsiella pneumoniae 2.35 Klebsiella pneumoniae 2.20 
B1 
(+++) (A) 
* B 622 
(Standard) Klebsiella pneumoniae 2.14 Klebsiella pneumoniae 2.09 
B2 
(+++) (A) 
* B 631 
(Standard) Klebsiella pneumoniae 2.11 Klebsiella pneumoniae 2.06 
B8 
(+++) (A) 
* C 324 
(Standard) Klebsiella pneumoniae 2.17 Klebsiella pneumoniae 2.14 
B9 
(+) (B) 
* C 442 
(Standard) Klebsiella pneumoniae 1.81 Klebsiella variicola 1.76 
B10 
(+++) (A) 
* C 293 
(Standard) Klebsiella pneumoniae 2.10 Klebsiella pneumoniae 2.08 
B11 
(+) (B) 
* C 6302 
(Standard) Klebsiella pneumoniae 1.83 Klebsiella pneumoniae 1.71 
B12 
(+++) (A) 
* C 6329 
(Standard) Klebsiella pneumoniae 2.03 Klebsiella pneumoniae 1.94 
C1 
(+++) (A) 
XXX 
(Standard) Candida glabrata 2.10 Candida glabrata 2.02 

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Matching Hints 

Matched Pattern Comment 
Enterobacter cloacae 20105_2 
CHB is a member of Enterobacter cloacae complex 
Escherichia coli ATCC 25922 
THL 
closely related to Shigella / Escherichia fergusonii and not definitely 
distinguishable at the moment 
Klebsiella aerogenes 15282_1 
CHB synonym of Enterobacter aerogenes 
Klebsiella aerogenes ATCC 
13048T THL synonym of Enterobacter aerogenes 
Klebsiella pneumoniae 37585 
PFM closely related to Klebsiella variicola 
Klebsiella pneumoniae 37595 
PFM closely related to Klebsiella variicola 
Klebsiella pneumoniae 
RV_BA_03_B LBK closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
ozaenae CCM 5792T CCM closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
ozaenae DSM 16358T DSM closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
ozaenae DSM 16358T HAM closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
pneumoniae 9295_1 CHB closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
pneumoniae DSM 30104T 
HAM 
closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
pneumoniae DSM 30104T_QC 
DSM 
closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
rhinoscleromatis DSM 16231T 
HAM 
closely related to Klebsiella variicola 
Klebsiella variicola 150416_01 
BRUS closely related to Klebsiella pneumoniae 
Matching Hints table--continued on next page 

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Matching Hints table--continued from previous page 
Matched Pattern Comment 
Klebsiella variicola 150519_01 
SAH closely related to Klebsiella pneumoniae 
Klebsiella variicola 150519_03 
SAH closely related to Klebsiella pneumoniae 
Klebsiella variicola 37924 PFM closely related to Klebsiella pneumoniae 
Klebsiella variicola CC_2053 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola CC_2123 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola DSM 
15968T DSM closely related to Klebsiella pneumoniae 
Klebsiella variicola DSM 
15968T HAM closely related to Klebsiella pneumoniae 
Klebsiella variicola NY_1036 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola NY_1064 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola NY_1125 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola TC_4131 
MCW closely related to Klebsiella pneumoniae 

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Meaning of Score Values 

Range Interpretation Symbols Color 
2.00 - 3.00 High-confidence identification (+++) green 
1.70 - 1.99 Low-confidence identification (+) yellow 
0.00 - 1.69 No Organism Identification Possible (-) red 

Meaning of Consistency Categories (A - C) 

Category Interpretation 
(A) 
High consistency: The best match is a high-confidence identification. The second-best match is (1) a 
high-confidence identification in which the species is identical to the best match, (2) a low-confidence 
identification in which the species or genus is identical to the best match, or (3) a non-identification. 
(B) 
Low consistency: The requirements for high consistency are not met. The best match is a high- or low-
confidence identification. The second-best match is (1) a high- or low-confidence identification in 
which the genus is identical to the best match or (2) a non-identification. 
(C) No consistency: The requirements for high or low consistency are not met. 

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Sample 1 

Sample Name: A3 
Sample Description: 
Sample ID: * A 5833 
Sample Creation Date/Time: 2021-03-22T12:21:42.779 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola 150519_03 SAH 2.53 244366 
2 
(+++) Klebsiella variicola 150416_01 BRUS 2.52 244366 
3 
(+++) Klebsiella variicola CC_2123 MCW 2.51 244366 
4 
(+++) Klebsiella variicola NY_1064 MCW 2.51 244366 
5 
(+++) Klebsiella variicola CC_2053 MCW 2.51 244366 
6 
(+++) Klebsiella variicola TC_4131 MCW 2.48 244366 
7 
(+++) Klebsiella variicola DSM 15968T DSM 2.47 244366 
8 
(+++) Klebsiella variicola 150519_01 SAH 2.44 244366 
9 
(+++) Klebsiella variicola NY_1125 MCW 2.44 244366 
10 
(+++) Klebsiella variicola NY_1036 MCW 2.43 244366 

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Sample 2 

Sample Name: A4 
Sample Description: 
Sample ID: * A 5844 
Sample Creation Date/Time: 2021-03-22T12:21:42.779 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.36 72407 
2 
(+++) Klebsiella pneumoniae 37585 PFM 2.29 573 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.28 72407 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.26 72407 
5 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.24 573 
6 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.21 574 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.16 574 
8 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.05 39831 
9 
(+++) Klebsiella pneumoniae 37595 PFM 2.04 573 
10 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.90 574 

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Sample 3 

Sample Name: A5 
Sample Description: 
Sample ID: * A 5850 
Sample Creation Date/Time: 2021-03-22T12:21:42.780 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.84 72407 
2 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.77 574 
3 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.68 72407 
4 
(-) Klebsiella aerogenes ATCC 13048T THL 1.68 28451 
5 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.65 72407 
6 
(-) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.62 574 
7 
(-) Enterobacter cloacae 20105_2 CHB 1.60 550 
8 
(-) Klebsiella pneumoniae RV_BA_03_B LBK 1.59 573 
9 
(-) Klebsiella aerogenes 15282_1 CHB 1.59 28451 
10 
(-) Klebsiella variicola NY_1036 MCW 1.55 244366 

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Sample 4 

Sample Name: A6 
Sample Description: 
Sample ID: * A 5851 
Sample Creation Date/Time: 2021-03-22T12:21:42.780 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.38 72407 
2 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.36 574 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.30 72407 
4 
(+++) Klebsiella pneumoniae 37585 PFM 2.30 573 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.30 72407 
6 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.29 573 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.20 574 
8 
(+++) Klebsiella variicola 150416_01 BRUS 2.16 244366 
9 
(+++) Klebsiella variicola TC_4131 MCW 2.13 244366 
10 
(+++) Klebsiella variicola 37924 PFM 2.10 244366 

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Sample 5 

Sample Name: A7 
Sample Description: 
Sample ID: * A 5854 
Sample Creation Date/Time: 2021-03-22T12:21:42.781 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.29 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.28 72407 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.26 72407 
4 
(+++) Klebsiella pneumoniae 37585 PFM 2.23 573 
5 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.19 573 
6 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.17 72407 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.16 574 
8 
(+++) Klebsiella pneumoniae 37595 PFM 2.01 573 
9 
(+++) Klebsiella variicola 150416_01 BRUS 2.00 244366 
10 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.96 39831 

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Sample 6 

Sample Name: A8 
Sample Description: 
Sample ID: * A 5856 
Sample Creation Date/Time: 2021-03-22T12:21:42.781 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.39 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.34 72407 
3 
(+++) Klebsiella pneumoniae 37585 PFM 2.26 573 
4 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.25 573 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.24 72407 
6 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.21 574 
7 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.17 72407 
8 
(+++) Klebsiella variicola TC_4131 MCW 2.10 244366 
9 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.09 39831 
10 
(+++) Klebsiella variicola 37924 PFM 2.09 244366 

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Sample 7 

Sample Name: A9 
Sample Description: 
Sample ID: * A 5860 
Sample Creation Date/Time: 2021-03-22T12:21:42.782 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.38 72407 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.37 72407 
3 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.36 574 
4 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.33 573 
5 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.29 574 
6 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.27 72407 
7 
(+++) Klebsiella pneumoniae 37585 PFM 2.24 573 
8 
(+++) Klebsiella pneumoniae 37595 PFM 2.14 573 
9 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.12 39831 
10 
(+++) Klebsiella variicola 150416_01 BRUS 2.09 244366 

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Sample 8 

Sample Name: A10 
Sample Description: 
Sample ID: * A 5937 
Sample Creation Date/Time: 2021-03-22T12:21:42.782 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.12 72407 
2 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.01 573 
3 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.98 72407 
4 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.97 574 
5 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.93 574 
6 
(+) Klebsiella pneumoniae 37585 PFM 1.93 573 
7 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.93 72407 
8 
(+) Klebsiella pneumoniae 37595 PFM 1.79 573 
9 
(+) Klebsiella variicola TC_4131 MCW 1.78 244366 
10 
(+) Klebsiella variicola NY_1064 MCW 1.77 244366 

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Sample 9 

Sample Name: A11 
Sample Description: 
Sample ID: * B 629 
Sample Creation Date/Time: 2021-03-22T12:21:42.783 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.92 72407 
2 
(+) Klebsiella pneumoniae RV_BA_03_B LBK 1.89 573 
3 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.82 72407 
4 
(+) Klebsiella variicola NY_1064 MCW 1.75 244366 
5 
(+) Klebsiella variicola DSM 15968T DSM 1.75 244366 
6 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.74 574 
7 
(+) Klebsiella variicola CC_2053 MCW 1.74 244366 
8 
(+) Klebsiella variicola NY_1125 MCW 1.73 244366 
9 
(+) Klebsiella variicola 150416_01 BRUS 1.73 244366 
10 
(+) Klebsiella variicola CC_2123 MCW 1.72 244366 

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Sample 10 

Sample Name: A12 
Sample Description: 
Sample ID: * B 576 
Sample Creation Date/Time: 2021-03-22T12:21:42.783 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.35 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.20 72407 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.19 72407 
4 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.15 573 
5 
(+++) Klebsiella pneumoniae 37585 PFM 2.13 573 
6 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.06 72407 
7 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.06 39831 
8 
(+++) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 2.01 574 
9 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.97 574 
10 
(+) Klebsiella variicola TC_4131 MCW 1.94 244366 

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Sample 11 

Sample Name: B1 
Sample Description: 
Sample ID: * B 622 
Sample Creation Date/Time: 2021-03-22T12:21:42.784 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.14 574 
2 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.09 573 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.09 72407 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.07 72407 
5 
(+++) Klebsiella pneumoniae 37585 PFM 2.02 573 
6 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.94 72407 
7 
(+) Klebsiella variicola CC_2053 MCW 1.92 244366 
8 
(+) Klebsiella variicola NY_1125 MCW 1.91 244366 
9 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.87 39831 
10 
(+) Klebsiella variicola TC_4131 MCW 1.86 244366 

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Sample 12 

Sample Name: B2 
Sample Description: 
Sample ID: * B 631 
Sample Creation Date/Time: 2021-03-22T12:21:42.784 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.11 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.06 72407 
3 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.03 573 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.02 72407 
5 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.00 39831 
6 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.99 72407 
7 
(+) Klebsiella variicola TC_4131 MCW 1.99 244366 
8 
(+) Klebsiella variicola NY_1036 MCW 1.99 244366 
9 
(+) Klebsiella variicola CC_2053 MCW 1.96 244366 
10 
(+) Klebsiella variicola NY_1125 MCW 1.94 244366 

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Sample 13 

Sample Name: B8 
Sample Description: 
Sample ID: * C 324 
Sample Creation Date/Time: 2021-03-22T12:21:42.785 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.17 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.14 72407 
3 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.01 573 
4 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.94 72407 
5 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.92 72407 
6 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.90 574 
7 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.89 39831 
8 
(+) Klebsiella variicola TC_4131 MCW 1.89 244366 
9 
(+) Klebsiella variicola NY_1064 MCW 1.86 244366 
10 
(+) Klebsiella variicola DSM 15968T DSM 1.86 244366 

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Run Identifier: 210322-1212-10113 Run Creation Date/Time: 2021-03-22T12:30:50.333 


Sample 14 

Sample Name: B9 
Sample Description: 
Sample ID: * C 442 
Sample Creation Date/Time: 2021-03-22T12:21:42.785 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.81 72407 
2 
(+) Klebsiella variicola DSM 15968T DSM 1.76 244366 
3 
(+) Klebsiella variicola NY_1125 MCW 1.74 244366 
4 
(+) Klebsiella variicola TC_4131 MCW 1.71 244366 
5 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.69 72407 
6 
(-) Klebsiella pneumoniae RV_BA_03_B LBK 1.67 573 
7 
(-) Klebsiella variicola DSM 15968T HAM 1.64 244366 
8 
(-) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.63 574 
9 
(-) Klebsiella variicola 150519_03 SAH 1.62 244366 
10 
(-) Escherichia coli ATCC 25922 THL 1.57 562 

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Run Identifier: 210322-1212-10113 Run Creation Date/Time: 2021-03-22T12:30:50.333 


Sample 15 

Sample Name: B10 
Sample Description: 
Sample ID: * C 293 
Sample Creation Date/Time: 2021-03-22T12:21:42.786 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.10 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.08 72407 
3 
(+) Klebsiella pneumoniae RV_BA_03_B LBK 1.93 573 
4 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.92 72407 
5 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.91 72407 
6 
(+) Klebsiella variicola TC_4131 MCW 1.85 244366 
7 
(+) Klebsiella variicola NY_1125 MCW 1.84 244366 
8 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.83 39831 
9 
(+) Klebsiella variicola CC_2123 MCW 1.78 244366 
10 
(+) Klebsiella variicola CC_2053 MCW 1.78 244366 

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Run Identifier: 210322-1212-10113 Run Creation Date/Time: 2021-03-22T12:30:50.333 


Sample 16 

Sample Name: B11 
Sample Description: 
Sample ID: * C 6302 
Sample Creation Date/Time: 2021-03-22T12:21:42.786 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.83 72407 
2 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.71 72407 
3 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.71 39831 
4 
(-) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.66 574 
5 
(-) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.64 574 
6 
(-) Klebsiella variicola CC_2123 MCW 1.59 244366 
7 
(-) Klebsiella variicola NY_1125 MCW 1.57 244366 
8 
(-) Klebsiella variicola NY_1036 MCW 1.54 244366 
9 
(-) Klebsiella variicola CC_2053 MCW 1.54 244366 
10 
(-) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.50 72407 

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Run Identifier: 210322-1212-10113 Run Creation Date/Time: 2021-03-22T12:30:50.333 


Sample 17 

Sample Name: B12 
Sample Description: 
Sample ID: * C 6329 
Sample Creation Date/Time: 2021-03-22T12:21:42.787 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.03 574 
2 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.94 72407 
3 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.79 39831 
4 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.76 72407 
5 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.72 574 
6 
(-) Klebsiella variicola NY_1125 MCW 1.69 244366 
7 
(-) Klebsiella aerogenes ATCC 13048T THL 1.69 28451 
8 
(-) Klebsiella variicola CC_2123 MCW 1.67 244366 
9 
(-) Klebsiella variicola NY_1036 MCW 1.66 244366 
10 
(-) Klebsiella variicola CC_2053 MCW 1.63 244366 

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Run Identifier: 210322-1212-10113 Run Creation Date/Time: 2021-03-22T12:30:50.333 


Sample 18 

Sample Name: C1 
Sample Description: 
Sample ID: XXX 
Sample Creation Date/Time: 2021-03-22T12:21:42.787 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Candida glabrata CBS 8947 CBS 2.10 5478 
2 
(+++) Candida glabrata CBS 2663 CBS 2.02 5478 
3 
(+++) Candida glabrata CBS 860 CBS 2.01 5478 
4 
(+) Candida glabrata 10035463_101 USH 1.98 5478 
5 
(+) Candida glabrata CBS 863 CBS 1.92 5478 
6 
(+) Candida glabrata ATCC 2001T THL 1.85 5478 
7 
(+) Candida glabrata CBS 2175 CBS 1.81 5478 
8 
(+) Candida glabrata 31 PSB 1.75 5478 
9 
(+) Candida glabrata CBS 858 CBS 1.74 5478 
10 
(+) Candida glabrata CBS 862 CBS 1.73 5478 

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