Bruker MALDI Biotyper 
Identification Results 


Run Info: 
Run Identifier: 210401-1149-10113 
Comment: 
Operator: maldi@FLEX-PC 
Run Creation Date/Time: 2021-04-01T12:03:21.408 
Number of Tests: 19 
Type: Standard 
BTS-QC: not present 
BTS-QC Position: 
Instrument ID: 269944.01064 
Server Version: 4.1.100 (PYTH) 174 2019-06-158_01-16-09 
Result Overview 

Sample 
Name Sample ID Organism (best match) Score 
Value 
Organism (second-best 
match) 
Score 
Value 
A1 
(+++) (A) 
* A 7006 
(Standard) Klebsiella variicola 2.33 Klebsiella variicola 2.30 
A2 
(+++) (A) 
* A 7047 
(Standard) Klebsiella pneumoniae 2.35 Klebsiella pneumoniae 2.31 
A3 
(+++) (A) 
* A 6820 
(Standard) Klebsiella pneumoniae 2.24 Klebsiella pneumoniae 2.23 
A4 
(+++) (A) 
* A 6878 
(Standard) Klebsiella pneumoniae 2.16 Klebsiella pneumoniae 2.16 
A5 
(+++) (A) 
* A 6882 
(Standard) Klebsiella pneumoniae 2.06 Klebsiella pneumoniae 2.05 
A6 
(+++) (B) 
* A 6932 
(Standard) Klebsiella pneumoniae 2.12 Klebsiella variicola 2.00 
A7 
(+++) (A) 
* B 430 
(Standard) Klebsiella pneumoniae 2.23 Klebsiella pneumoniae 2.16 
Result overview table--continued on next page 

Report created at 2021-04-01T12:07:01 Research Use Only Page 1 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 

Result overview table--continued from previous page 
Sample 
Name Sample ID Organism (best match) Score 
Value 
Organism (second-best 
match) 
Score 
Value 
A8 
(+++) (B) 
* B 464 
(Standard) Klebsiella pneumoniae 2.19 Klebsiella variicola 2.06 
A9 
(+++) (A) 
* C 7400 
(Standard) Klebsiella pneumoniae 2.31 Klebsiella pneumoniae 2.25 
A10 
(+++) (A) 
* C 7447 
(Standard) Klebsiella variicola 2.25 Klebsiella variicola 2.18 
A11 
(+++) (A) 
* C 7468 
(Standard) Klebsiella pneumoniae 2.37 Klebsiella pneumoniae 2.35 
A12 
(+++) (A) 
* C 7471 
(Standard) Klebsiella pneumoniae 2.49 Klebsiella pneumoniae 2.40 
B1 
(+++) (A) 
* C 7342 
(Standard) Klebsiella variicola 2.31 Klebsiella variicola 2.31 
B2 
(+++) (A) 
* C 7379 
(Standard) Klebsiella pneumoniae 2.41 Klebsiella pneumoniae 2.39 
B3 
(+++) (A) 
* C 7473 
(Standard) Klebsiella pneumoniae 2.38 Klebsiella pneumoniae 2.38 
B4 
(+++) (A) 
* C 7481 
(Standard) Klebsiella variicola 2.37 Klebsiella variicola 2.34 
B5 
(+++) (A) 
* C 7491 
(Standard) Klebsiella pneumoniae 2.49 Klebsiella pneumoniae 2.45 
B6 
(+++) (A) 
* C 7499 
(Standard) Klebsiella variicola 2.32 Klebsiella variicola 2.31 
B7 
(+) (B) 
* PROVOZ 270 
PAR 
(Standard) 
Staphylococcus epidermidis 1.97 Staphylococcus epidermidis 1.95 

Report created at 2021-04-01T12:07:01 Research Use Only Page 2 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 

Matching Hints 

Matched Pattern Comment 
Klebsiella pneumoniae 37585 
PFM closely related to Klebsiella variicola 
Klebsiella pneumoniae 37595 
PFM closely related to Klebsiella variicola 
Klebsiella pneumoniae 
RV_BA_03_B LBK closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
ozaenae CCM 5792T CCM closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
ozaenae DSM 16358T DSM closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
ozaenae DSM 16358T HAM closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
pneumoniae 9295_1 CHB closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
pneumoniae DSM 30104T 
HAM 
closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
pneumoniae DSM 30104T_QC 
DSM 
closely related to Klebsiella variicola 
Klebsiella pneumoniae ssp 
rhinoscleromatis DSM 16231T 
HAM 
closely related to Klebsiella variicola 
Klebsiella variicola 150416_01 
BRUS closely related to Klebsiella pneumoniae 
Klebsiella variicola 150519_03 
SAH closely related to Klebsiella pneumoniae 
Klebsiella variicola 37924 PFM closely related to Klebsiella pneumoniae 
Klebsiella variicola CC_2053 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola CC_2123 
MCW closely related to Klebsiella pneumoniae 
Matching Hints table--continued on next page 

Report created at 2021-04-01T12:07:01 Research Use Only Page 3 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 

Matching Hints table--continued from previous page 
Matched Pattern Comment 
Klebsiella variicola DSM 
15968T DSM closely related to Klebsiella pneumoniae 
Klebsiella variicola DSM 
15968T HAM closely related to Klebsiella pneumoniae 
Klebsiella variicola NY_1036 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola NY_1064 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola NY_1125 
MCW closely related to Klebsiella pneumoniae 
Klebsiella variicola TC_4131 
MCW closely related to Klebsiella pneumoniae 
Serratia marcescens 13103_1 
CHB 
Species marcescens / ureilytica of the genus Serratia have very similar patterns: 
Therefore distinguishing their species is difficult. 
Serratia marcescens DSM 12481 
DSM 
Species marcescens / ureilytica of the genus Serratia have very similar patterns: 
Therefore distinguishing their species is difficult. 
Serratia marcescens ssp 
marcescens DSM 30121T DSM 
Species marcescens / ureilytica of the genus Serratia have very similar patterns: 
Therefore distinguishing their species is difficult. 

Report created at 2021-04-01T12:07:01 Research Use Only Page 4 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 

Meaning of Score Values 

Range Interpretation Symbols Color 
2.00 - 3.00 High-confidence identification (+++) green 
1.70 - 1.99 Low-confidence identification (+) yellow 
0.00 - 1.69 No Organism Identification Possible (-) red 

Meaning of Consistency Categories (A - C) 

Category Interpretation 
(A) 
High consistency: The best match is a high-confidence identification. The second-best match is (1) a 
high-confidence identification in which the species is identical to the best match, (2) a low-confidence 
identification in which the species or genus is identical to the best match, or (3) a non-identification. 
(B) 
Low consistency: The requirements for high consistency are not met. The best match is a high- or low-
confidence identification. The second-best match is (1) a high- or low-confidence identification in 
which the genus is identical to the best match or (2) a non-identification. 
(C) No consistency: The requirements for high or low consistency are not met. 

Report created at 2021-04-01T12:07:01 Research Use Only Page 5 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 1 

Sample Name: A1 
Sample Description: 
Sample ID: * A 7006 
Sample Creation Date/Time: 2021-04-01T11:52:36.460 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola DSM 15968T DSM 2.33 244366 
2 
(+++) Klebsiella variicola CC_2053 MCW 2.30 244366 
3 
(+++) Klebsiella variicola NY_1064 MCW 2.30 244366 
4 
(+++) Klebsiella variicola 150416_01 BRUS 2.29 244366 
5 
(+++) Klebsiella variicola 150519_03 SAH 2.27 244366 
6 
(+++) Klebsiella variicola TC_4131 MCW 2.27 244366 
7 
(+++) Klebsiella variicola NY_1125 MCW 2.27 244366 
8 
(+++) Klebsiella variicola 37924 PFM 2.23 244366 
9 
(+++) Klebsiella variicola CC_2123 MCW 2.20 244366 
10 
(+++) Klebsiella variicola NY_1036 MCW 2.17 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 6 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 2 

Sample Name: A2 
Sample Description: 
Sample ID: * A 7047 
Sample Creation Date/Time: 2021-04-01T11:52:36.461 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.35 72407 
2 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.31 573 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.20 72407 
4 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.17 574 
5 
(+++) Klebsiella pneumoniae 37585 PFM 2.07 573 
6 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.07 72407 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.05 574 
8 
(+) Klebsiella pneumoniae 37595 PFM 1.99 573 
9 
(+) Klebsiella variicola 150519_03 SAH 1.95 244366 
10 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.95 39831 

Report created at 2021-04-01T12:07:01 Research Use Only Page 7 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 3 

Sample Name: A3 
Sample Description: 
Sample ID: * A 6820 
Sample Creation Date/Time: 2021-04-01T11:52:36.461 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.24 573 
2 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.23 574 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.20 72407 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.18 72407 
5 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.07 574 
6 
(+++) Klebsiella pneumoniae 37585 PFM 2.06 573 
7 
(+++) Klebsiella variicola NY_1064 MCW 2.05 244366 
8 
(+++) Klebsiella pneumoniae 37595 PFM 2.05 573 
9 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.05 72407 
10 
(+) Klebsiella variicola DSM 15968T DSM 1.99 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 8 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 4 

Sample Name: A4 
Sample Description: 
Sample ID: * A 6878 
Sample Creation Date/Time: 2021-04-01T11:52:36.462 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.16 574 
2 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.16 573 
3 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.14 574 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.08 72407 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.07 72407 
6 
(+) Klebsiella pneumoniae 37595 PFM 1.93 573 
7 
(+) Klebsiella variicola 37924 PFM 1.91 244366 
8 
(+) Klebsiella variicola DSM 15968T HAM 1.91 244366 
9 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.87 72407 
10 
(+) Klebsiella pneumoniae 37585 PFM 1.87 573 

Report created at 2021-04-01T12:07:01 Research Use Only Page 9 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 5 

Sample Name: A5 
Sample Description: 
Sample ID: * A 6882 
Sample Creation Date/Time: 2021-04-01T11:52:36.462 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.06 72407 
2 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.05 574 
3 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.91 72407 
4 
(+) Klebsiella pneumoniae 37585 PFM 1.89 573 
5 
(+) Serratia marcescens 13103_1 CHB 1.88 615 
6 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.86 72407 
7 
(+) Serratia marcescens DSM 12481 DSM 1.78 615 
8 
(+) Serratia marcescens ssp marcescens DSM 30121T DSM 1.75 211759 
9 
(+) Klebsiella variicola TC_4131 MCW 1.74 244366 
10 
(+) Klebsiella variicola NY_1064 MCW 1.74 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 10 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 6 

Sample Name: A6 
Sample Description: 
Sample ID: * A 6932 
Sample Creation Date/Time: 2021-04-01T11:52:36.463 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.12 573 
2 
(+++) Klebsiella variicola DSM 15968T HAM 2.00 244366 
3 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.97 574 
4 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.94 574 
5 
(+) Klebsiella variicola DSM 15968T DSM 1.83 244366 
6 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.81 72407 
7 
(+) Klebsiella variicola 150519_03 SAH 1.74 244366 
8 
(+) Klebsiella pneumoniae 37595 PFM 1.73 573 
9 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.70 72407 
10 
(-) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.67 574 

Report created at 2021-04-01T12:07:01 Research Use Only Page 11 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 7 

Sample Name: A7 
Sample Description: 
Sample ID: * B 430 
Sample Creation Date/Time: 2021-04-01T11:52:36.463 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.23 573 
2 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.16 574 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.16 72407 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.16 72407 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.12 72407 
6 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.11 574 
7 
(+++) Klebsiella pneumoniae 37585 PFM 2.04 573 
8 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.95 39831 
9 
(+) Klebsiella variicola DSM 15968T HAM 1.94 244366 
10 
(+) Klebsiella variicola DSM 15968T DSM 1.89 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 12 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 8 

Sample Name: A8 
Sample Description: 
Sample ID: * B 464 
Sample Creation Date/Time: 2021-04-01T11:52:36.463 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.19 573 
2 
(+++) Klebsiella variicola DSM 15968T HAM 2.06 244366 
3 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 1.95 574 
4 
(+) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 1.92 72407 
5 
(+) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 1.91 39831 
6 
(+) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 1.90 574 
7 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 1.86 72407 
8 
(+) Klebsiella pneumoniae 37595 PFM 1.84 573 
9 
(+) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 1.79 72407 
10 
(+) Klebsiella pneumoniae ssp ozaenae CCM 5792T CCM 1.77 574 

Report created at 2021-04-01T12:07:01 Research Use Only Page 13 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 9 

Sample Name: A9 
Sample Description: 
Sample ID: * C 7400 
Sample Creation Date/Time: 2021-04-01T11:52:36.464 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.31 72407 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.25 72407 
3 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.22 573 
4 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.17 72407 
5 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.10 39831 
6 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.09 574 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.04 574 
8 
(+++) Klebsiella pneumoniae 37585 PFM 2.03 573 
9 
(+) Klebsiella variicola DSM 15968T DSM 1.98 244366 
10 
(+) Klebsiella variicola DSM 15968T HAM 1.95 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 14 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 10 

Sample Name: A10 
Sample Description: 
Sample ID: * C 7447 
Sample Creation Date/Time: 2021-04-01T11:52:36.465 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola DSM 15968T DSM 2.25 244366 
2 
(+++) Klebsiella variicola DSM 15968T HAM 2.18 244366 
3 
(+++) Klebsiella variicola 150416_01 BRUS 2.16 244366 
4 
(+++) Klebsiella variicola 150519_03 SAH 2.14 244366 
5 
(+++) Klebsiella variicola TC_4131 MCW 2.13 244366 
6 
(+++) Klebsiella variicola NY_1125 MCW 2.12 244366 
7 
(+++) Klebsiella variicola CC_2053 MCW 2.12 244366 
8 
(+++) Klebsiella variicola NY_1064 MCW 2.08 244366 
9 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.05 573 
10 
(+++) Klebsiella variicola CC_2123 MCW 2.04 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 15 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 11 

Sample Name: A11 
Sample Description: 
Sample ID: * C 7468 
Sample Creation Date/Time: 2021-04-01T11:52:36.465 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.37 72407 
2 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.35 573 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.33 72407 
4 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.27 574 
5 
(+++) Klebsiella pneumoniae 37585 PFM 2.26 573 
6 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.25 72407 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.24 574 
8 
(+++) Klebsiella pneumoniae 37595 PFM 2.06 573 
9 
(+++) Klebsiella variicola CC_2053 MCW 2.04 244366 
10 
(+++) Klebsiella variicola 150416_01 BRUS 2.03 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 16 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 12 

Sample Name: A12 
Sample Description: 
Sample ID: * C 7471 
Sample Creation Date/Time: 2021-04-01T11:52:36.466 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.49 72407 
2 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.40 573 
3 
(+++) Klebsiella pneumoniae 37585 PFM 2.36 573 
4 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.35 574 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.32 72407 
6 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.25 574 
7 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.21 72407 
8 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.17 39831 
9 
(+++) Klebsiella pneumoniae 37595 PFM 2.15 573 
10 
(+++) Klebsiella variicola 150519_03 SAH 2.12 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 17 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 13 

Sample Name: B1 
Sample Description: 
Sample ID: * C 7342 
Sample Creation Date/Time: 2021-04-01T11:52:36.466 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola DSM 15968T DSM 2.31 244366 
2 
(+++) Klebsiella variicola CC_2053 MCW 2.31 244366 
3 
(+++) Klebsiella variicola 150519_03 SAH 2.21 244366 
4 
(+++) Klebsiella variicola DSM 15968T HAM 2.21 244366 
5 
(+++) Klebsiella variicola NY_1125 MCW 2.20 244366 
6 
(+++) Klebsiella variicola 150416_01 BRUS 2.19 244366 
7 
(+++) Klebsiella variicola TC_4131 MCW 2.15 244366 
8 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.10 573 
9 
(+++) Klebsiella variicola CC_2123 MCW 2.10 244366 
10 
(+++) Klebsiella variicola NY_1036 MCW 2.07 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 18 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 14 

Sample Name: B2 
Sample Description: 
Sample ID: * C 7379 
Sample Creation Date/Time: 2021-04-01T11:52:36.467 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.41 72407 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.39 72407 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.34 72407 
4 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.34 574 
5 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.30 573 
6 
(+++) Klebsiella pneumoniae 37585 PFM 2.29 573 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.27 574 
8 
(+++) Klebsiella variicola TC_4131 MCW 2.20 244366 
9 
(+++) Klebsiella variicola 150416_01 BRUS 2.14 244366 
10 
(+++) Klebsiella variicola NY_1125 MCW 2.14 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 19 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 15 

Sample Name: B3 
Sample Description: 
Sample ID: * C 7473 
Sample Creation Date/Time: 2021-04-01T11:52:36.467 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.38 574 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.38 72407 
3 
(+++) Klebsiella pneumoniae 37585 PFM 2.36 573 
4 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.34 573 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.34 72407 
6 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.30 72407 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.29 574 
8 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.19 39831 
9 
(+++) Klebsiella variicola 150416_01 BRUS 2.15 244366 
10 
(+++) Klebsiella pneumoniae 37595 PFM 2.12 573 

Report created at 2021-04-01T12:07:01 Research Use Only Page 20 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 16 

Sample Name: B4 
Sample Description: 
Sample ID: * C 7481 
Sample Creation Date/Time: 2021-04-01T11:52:36.467 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola TC_4131 MCW 2.37 244366 
2 
(+++) Klebsiella variicola CC_2053 MCW 2.34 244366 
3 
(+++) Klebsiella variicola DSM 15968T DSM 2.31 244366 
4 
(+++) Klebsiella variicola 150519_03 SAH 2.29 244366 
5 
(+++) Klebsiella variicola NY_1064 MCW 2.28 244366 
6 
(+++) Klebsiella variicola 37924 PFM 2.28 244366 
7 
(+++) Klebsiella variicola NY_1125 MCW 2.27 244366 
8 
(+++) Klebsiella variicola 150416_01 BRUS 2.24 244366 
9 
(+++) Klebsiella variicola CC_2123 MCW 2.18 244366 
10 
(+++) Klebsiella variicola NY_1036 MCW 2.13 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 21 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 17 

Sample Name: B5 
Sample Description: 
Sample ID: * C 7491 
Sample Creation Date/Time: 2021-04-01T11:52:36.468 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella pneumoniae RV_BA_03_B LBK 2.49 573 
2 
(+++) Klebsiella pneumoniae ssp pneumoniae 9295_1 CHB 2.45 72407 
3 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T_QC DSM 2.43 72407 
4 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T HAM 2.39 574 
5 
(+++) Klebsiella pneumoniae ssp pneumoniae DSM 30104T HAM 2.35 72407 
6 
(+++) Klebsiella pneumoniae 37585 PFM 2.32 573 
7 
(+++) Klebsiella pneumoniae ssp ozaenae DSM 16358T DSM 2.30 574 
8 
(+++) Klebsiella pneumoniae ssp rhinoscleromatis DSM 16231T HAM 2.15 39831 
9 
(+++) Klebsiella pneumoniae 37595 PFM 2.12 573 
10 
(+++) Klebsiella variicola DSM 15968T DSM 2.12 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 22 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 18 

Sample Name: B6 
Sample Description: 
Sample ID: * C 7499 
Sample Creation Date/Time: 2021-04-01T11:52:36.469 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based A 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+++) Klebsiella variicola DSM 15968T DSM 2.32 244366 
2 
(+++) Klebsiella variicola CC_2053 MCW 2.31 244366 
3 
(+++) Klebsiella variicola TC_4131 MCW 2.30 244366 
4 
(+++) Klebsiella variicola 150519_03 SAH 2.28 244366 
5 
(+++) Klebsiella variicola 150416_01 BRUS 2.24 244366 
6 
(+++) Klebsiella variicola NY_1125 MCW 2.22 244366 
7 
(+++) Klebsiella variicola NY_1064 MCW 2.20 244366 
8 
(+++) Klebsiella variicola CC_2123 MCW 2.17 244366 
9 
(+++) Klebsiella variicola 37924 PFM 2.16 244366 
10 
(+++) Klebsiella variicola NY_1036 MCW 2.09 244366 

Report created at 2021-04-01T12:07:01 Research Use Only Page 23 of 

24

Run Identifier: 210401-1149-10113 Run Creation Date/Time: 2021-04-01T12:03:21.408 


Sample 19 

Sample Name: B7 
Sample Description: 
Sample ID: * PROVOZ 270 PAR 
Sample Creation Date/Time: 2021-04-01T11:52:36.469 
Sample Type: Standard 
Identification Method: MALDI Biotyper MSP Identification Standard Method 1.1 
Preprocessing Method: MALDI Biotyper Preprocessing Standard Method 1.1 
ACQ Method: D:\Methods\flexControlMethods\MBT_FC.par 
AutoXecute Method: MBT_AutoX 
Consistency Category (based B 

on 2 best matches): 
Applied Taxonomy Tree: Bruker Taxonomy 

Rank 
(Quality) Matched Pattern Score 
Value NCBI Identifier 
1 
(+) Staphylococcus epidermidis DSM 1798 DSM 1.97 1282 
2 
(+) Staphylococcus epidermidis 10547 CHB 1.95 1282 
3 
(+) Staphylococcus epidermidis 6b_s ESL 1.90 1282 
4 
(+) Staphylococcus epidermidis DSM 3269 DSM 1.86 1282 
5 
(+) Staphylococcus epidermidis DSM 4851 DSM 1.76 1282 
6 
(+) Staphylococcus epidermidis 4b_r ESL 1.73 1282 
7 
(+) Staphylococcus epidermidis ATCC 12228 THL 1.72 1282 
8 
(-) Staphylococcus epidermidis ATCC 14990T THL 1.62 1282 
9 
(-) Staphylococcus epidermidis ATCC 12228 CHB 1.47 1282 
10 
(-) Staphylococcus succinus ssp casei DSM 15096T DSM 1.42 201828 

Report created at 2021-04-01T12:07:01 Research Use Only Page 24 of 

24